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Revision 27386 - Directory Listing
Modified Tue Sep 26 09:52:08 2017 UTC (4 weeks ago) by nyulas
Added missing value sets to Logical Definition tab for type of injury as well as for different fracture types and burn qualifiers.

Revision 27385 - Directory Listing
Modified Fri May 5 13:37:38 2017 UTC (5 months, 2 weeks ago) by nyulas
Configuration UI to support post-coordination of External Causes in iCAT (some known issues are pending)

Revision 27384 - Directory Listing
Modified Fri May 5 13:05:43 2017 UTC (5 months, 2 weeks ago) by nyulas
Configuration UI to support post-coordination of External Causes in iCAT (some known issues are pending)

Revision 27383 - Directory Listing
Modified Fri May 5 13:03:35 2017 UTC (5 months, 2 weeks ago) by nyulas
Configuration UI to support post-coordination of External Causes in iCAT (some known issues are pending)

Revision 27379 - Directory Listing
Modified Fri Mar 17 06:01:51 2017 UTC (7 months, 1 week ago) by nyulas
Added value selector widgets for post-coordination axes for the external causes chapter 

Revision 27378 - Directory Listing
Modified Wed Mar 15 11:41:04 2017 UTC (7 months, 1 week ago) by nyulas
Added extra columns to post-coordination grid of external causes chapter, to allow post-coordination along the "normal" ICD entity axes as well.
This may need some tweaking based on the feedback that we receive from WHO after testing, in particular we still need to add the editors for each PC axis that we included in the grid.

Revision 27377 - Directory Listing
Modified Wed Mar 15 08:44:28 2017 UTC (7 months, 1 week ago) by nyulas
Added support for coding notes. As part of this enhancement:
- we modified ICDLinearizationWidget to extend MultilevelInstanceGridWidget instead of InstanceGridWidget,
- we extended the configuration vocabulary significantly (see changes to FormConstants),
- we rewrote InstanceGridWidget significantly


Revision 27376 - Directory Listing
Modified Wed Jan 25 14:48:23 2017 UTC (8 months, 4 weeks ago) by tudorache
generate UUIDs for new instances

Revision 27374 - Directory Listing
Modified Thu Sep 15 09:43:16 2016 UTC (13 months, 1 week ago) by nyulas
Added ICECI Value Set specific UI configurations

Revision 27358 - Directory Listing
Modified Sat Jul 9 15:47:44 2016 UTC (15 months, 2 weeks ago) by tudorache
don't show the proposal URL if null

Revision 27357 - Directory Listing
Modified Fri Jul 8 21:53:04 2016 UTC (15 months, 2 weeks ago) by tudorache
Cleaning up labels before comparing them with the spreadsheet values; triming, and compressing spaces and tabs to one space.

Revision 27355 - Directory Listing
Modified Sat Jun 4 23:11:32 2016 UTC (16 months, 2 weeks ago) by nyulas
Minor: Updated FormConstants to include field_type value "noicon", and used this in ReferenceFieldWidget.

Revision 27354 - Directory Listing
Modified Sat Jun 4 01:31:13 2016 UTC (16 months, 2 weeks ago) by nyulas
Minor: Fixed typo in warning message

Revision 27353 - Directory Listing
Modified Sat Jun 4 01:29:44 2016 UTC (16 months, 2 weeks ago) by nyulas
Added support for search in the InternalReferenceFieldWidget

Revision 27352 - Directory Listing
Modified Sat Jun 4 01:27:24 2016 UTC (16 months, 2 weeks ago) by nyulas
A long due commit of the code in which we separate the more general client-server interaction, which applies for all WHO-FIC classifications, from the ICD specific code. The primary motivation for this separation was to be able to create iCATs for other classifications as well, such as ICHI/ICI.

Revision 27351 - Directory Listing
Modified Sat Jun 4 01:20:56 2016 UTC (16 months, 2 weeks ago) by nyulas
Updated iCAT to support more post-coordination axes, such as "Associated with", as well as fracture qualifiers, burn qualifiers and injury types.

Revision 27349 - Directory Listing
Modified Sat Apr 23 09:01:39 2016 UTC (18 months ago) by tudorache
just formatting

Revision 27348 - Directory Listing
Modified Sat Apr 23 08:46:58 2016 UTC (18 months ago) by tudorache
fix for createICDClass: getPublicId is not part of the create class transaction anymore, because when it failed with class not found, the db transaction would be rolled back

Revision 27347 - Directory Listing
Modified Sat Apr 23 08:44:28 2016 UTC (18 months ago) by tudorache
Added the apache http client, because of a weird class not found exception (org.apache.http.client.ClientProtocolException). This is replicated in gwt-dev, but not sure where it was found before by tomcat (used to work).


Revision 27346 - Directory Listing
Modified Sat Apr 23 06:24:15 2016 UTC (18 months ago) by tudorache
excluding log4j-1.2.12.jar from the lib path (it is already included)

Revision 27345 - Directory Listing
Modified Sat Apr 23 06:19:17 2016 UTC (18 months ago) by tudorache
excluding commons-lang-2.0.jar from protege-owl dir in the classpath, because it clashes with the one used by opencsv

Revision 27344 - Directory Listing
Modified Thu Apr 7 18:25:41 2016 UTC (18 months, 2 weeks ago) by tudorache
fixed the check for oldValue exists for import proposals

Revision 27343 - Directory Listing
Modified Fri Mar 11 01:36:02 2016 UTC (19 months, 2 weeks ago) by tudorache
trim the old and new values for edit proposals before comparing them

Revision 27342 - Directory Listing
Modified Mon Dec 14 13:11:23 2015 UTC (22 months, 1 week ago) by nyulas
Increased linearization view height to fit ICD-O linearization without scrolling.

Revision 27325 - Directory Listing
Modified Mon Dec 14 01:09:41 2015 UTC (22 months, 1 week ago) by nyulas
Added Classification Properties tab and updated Terms tab for Chapter X

Revision 27322 - Directory Listing
Modified Sun Jul 5 06:34:01 2015 UTC (2 years, 3 months ago) by tudorache
has to downgrade to opencsv 2.3 because the servers only have java 6 :(

Revision 27321 - Directory Listing
Modified Sat Jul 4 23:04:50 2015 UTC (2 years, 3 months ago) by tudorache
icd.jar compiled with java 6 for real

Revision 27320 - Directory Listing
Modified Sat Jul 4 22:51:21 2015 UTC (2 years, 3 months ago) by tudorache
new icd.jar compiled for java 6

Revision 27319 - Directory Listing
Modified Sat Jul 4 22:45:53 2015 UTC (2 years, 3 months ago) by tudorache
new icd.jar

Revision 27318 - Directory Listing
Modified Sat Jul 4 22:39:32 2015 UTC (2 years, 3 months ago) by tudorache
The  HTML form used to upload ICD proposals

Revision 27317 - Directory Listing
Modified Sat Jul 4 22:38:45 2015 UTC (2 years, 3 months ago) by tudorache
only import proposals with the status accepted


Revision 27316 - Directory Listing
Modified Sat Jul 4 21:58:55 2015 UTC (2 years, 3 months ago) by tudorache
using opencsv to handle the csv

Revision 27315 - Directory Listing
Modified Sat Jul 4 00:07:11 2015 UTC (2 years, 3 months ago) by tudorache
account for an exception in the icd public platform: defintion and title proposals are always edit, even if they are add

Revision 27314 - Directory Listing
Modified Fri Jul 3 23:37:39 2015 UTC (2 years, 3 months ago) by tudorache
syncronized the write to file method, so that only one thread can write to the file at a time

Revision 27313 - Directory Listing
Modified Fri Jul 3 22:32:39 2015 UTC (2 years, 3 months ago) by tudorache
made the default max result file 10MB

Revision 27312 - Directory Listing
Modified Fri Jul 3 22:15:16 2015 UTC (2 years, 3 months ago) by tudorache
the change description/transaction text is now in HTML form and much more readable.

Revision 27311 - Directory Listing
Modified Fri Jul 3 21:57:21 2015 UTC (2 years, 3 months ago) by tudorache
import icons

Revision 27310 - Directory Listing
Modified Fri Jul 3 21:24:45 2015 UTC (2 years, 3 months ago) by tudorache
fix for the counts

Revision 27309 - Directory Listing
Modified Fri Jul 3 21:24:29 2015 UTC (2 years, 3 months ago) by tudorache
attach the transaction to the entity

Revision 27308 - Directory Listing
Modified Fri Jul 3 19:45:59 2015 UTC (2 years, 3 months ago) by tudorache
better result reporting

Revision 27307 - Directory Listing
Modified Fri Jul 3 08:16:43 2015 UTC (2 years, 3 months ago) by tudorache
minor fix

Revision 27306 - Directory Listing
Modified Fri Jul 3 07:56:00 2015 UTC (2 years, 3 months ago) by tudorache
minor

Revision 27305 - Directory Listing
Modified Fri Jul 3 07:37:43 2015 UTC (2 years, 3 months ago) by tudorache
writing also the shortTermId besides the termId, different tools might use different ones

Revision 27304 - Directory Listing
Modified Fri Jul 3 07:17:54 2015 UTC (2 years, 3 months ago) by tudorache
several fixes and more logging

Revision 27303 - Directory Listing
Modified Fri Jul 3 06:56:38 2015 UTC (2 years, 3 months ago) by nyulas
Reverted to ICD Content Model

Revision 27302 - Directory Listing
Modified Fri Jul 3 04:47:23 2015 UTC (2 years, 3 months ago) by tudorache
write the output to the output file

Revision 27301 - Directory Listing
Modified Fri Jul 3 04:46:54 2015 UTC (2 years, 3 months ago) by tudorache
refactor of TextUtil

Revision 27300 - Directory Listing
Modified Fri Jul 3 04:46:25 2015 UTC (2 years, 3 months ago) by tudorache
minor typo


Revision 27299 - Directory Listing
Modified Fri Jul 3 04:45:59 2015 UTC (2 years, 3 months ago) by tudorache
minor typo


Revision 27298 - Directory Listing
Modified Thu Jul 2 21:41:58 2015 UTC (2 years, 3 months ago) by tudorache
just import reorg, nothing real

Revision 27297 - Directory Listing
Modified Thu Jul 2 21:40:48 2015 UTC (2 years, 3 months ago) by tudorache
just import reorg, nothing real

Revision 27296 - Directory Listing
Modified Wed Jun 24 21:11:39 2015 UTC (2 years, 4 months ago) by tudorache
finalized the importReifiedValue

Revision 27295 - Directory Listing
Modified Mon Jun 22 22:35:14 2015 UTC (2 years, 4 months ago) by tudorache
moved some methods to ICDProposal

Revision 27294 - Directory Listing
Modified Fri Jun 19 00:13:16 2015 UTC (2 years, 4 months ago) by tudorache
small changes

Revision 27293 - Directory Listing
Modified Thu Jun 18 23:42:32 2015 UTC (2 years, 4 months ago) by tudorache
first implementation of delete proposal


Revision 27292 - Directory Listing
Modified Thu Jun 18 22:26:08 2015 UTC (2 years, 4 months ago) by tudorache
many refactorings and the first implementation of add proposal

Revision 27291 - Directory Listing
Modified Thu Jun 18 18:35:14 2015 UTC (2 years, 4 months ago) by tudorache
More refactoring:
- import is now per row, not per group
- the import will generate a file with the status of each row that will be appended
- etc.

Revision 27290 - Directory Listing
Modified Wed Jun 17 23:53:48 2015 UTC (2 years, 4 months ago) by tudorache
even more refactoring

Revision 27289 - Directory Listing
Modified Wed Jun 17 23:16:43 2015 UTC (2 years, 4 months ago) by tudorache
some refactorings and more checks. Passing the project and user, also

Revision 27288 - Directory Listing
Modified Wed Jun 17 22:53:28 2015 UTC (2 years, 4 months ago) by tudorache
intermediat commit for importing ICD proposals, not done, yet

Revision 27287 - Directory Listing
Modified Thu Jun 4 00:15:53 2015 UTC (2 years, 4 months ago) by tudorache
temp workaround

Revision 27286 - Directory Listing
Modified Wed Jun 3 23:51:28 2015 UTC (2 years, 4 months ago) by tudorache
Finalizing the service implementation, and created the upload proposals class.

Revision 27285 - Directory Listing
Modified Wed Jun 3 23:37:01 2015 UTC (2 years, 4 months ago) by tudorache
check api key before processing the  proposals 

Revision 27284 - Directory Listing
Modified Wed Jun 3 23:25:46 2015 UTC (2 years, 4 months ago) by tudorache
Refactored the file upload service into uploading icd proposals

Revision 27283 - Directory Listing
Modified Wed Jun 3 23:10:48 2015 UTC (2 years, 4 months ago) by tudorache
added util method to upload a file using multipart

Revision 27282 - Directory Listing
Modified Wed Jun 3 22:37:56 2015 UTC (2 years, 4 months ago) by tudorache
upload file service

Revision 27279 - Directory Listing
Modified Thu May 7 22:53:48 2015 UTC (2 years, 5 months ago) by tudorache
This is a branch for the work to upgrade iCAT to the new BP REST API

Revision 27278 - Directory Listing
Modified Tue Mar 3 19:23:07 2015 UTC (2 years, 7 months ago) by nyulas
Re-added editing permissions for LinearizationEditors group for the linearization specifications, and increased size of linearization_grid to fit the Ophthalmology linearization.
These configurations have been lost in rev. 27225, when we added the post-coordination tab.

Revision 27261 - Directory Listing
Modified Tue Oct 28 10:08:18 2014 UTC (2 years, 11 months ago) by nyulas
Complete iCAT-ICI prototype configuration. 

Revision 27260 - Directory Listing
Modified Tue Oct 28 09:21:10 2014 UTC (2 years, 11 months ago) by nyulas
Fixed widget for selecting value for "Recipient Type" and added value selectors for "Entity Added in Procedure", "Entity Removed in Procedure", "Extent" and "Complexity" 

Revision 27259 - Directory Listing
Modified Tue Oct 28 08:50:29 2014 UTC (2 years, 11 months ago) by nyulas
Fixed several issues with display text and namespaces in ICI configuration file.

Revision 27258 - Directory Listing
Modified Tue Oct 28 07:14:06 2014 UTC (2 years, 11 months ago) by nyulas
some html files for iCAT-ICI prototype

Revision 27257 - Directory Listing
Modified Mon Oct 27 23:17:14 2014 UTC (2 years, 11 months ago) by nyulas
Added iCAT-ICHI logos

Revision 27255 - Directory Listing
Modified Wed Oct 15 01:21:51 2014 UTC (3 years ago) by nyulas
initial configuration for iCAT-ICI

Revision 27254 - Directory Listing
Modified Mon Oct 13 09:12:51 2014 UTC (3 years ago) by tudorache
updated admin config

Revision 27253 - Directory Listing
Modified Mon Oct 13 09:07:03 2014 UTC (3 years ago) by tudorache
updated admin config

Revision 27252 - Directory Listing
Modified Mon Oct 13 07:22:22 2014 UTC (3 years ago) by nyulas
Fixing a sneaky bug, that made list of allowed values for value selector widget work only occasionally.

Revision 27251 - Directory Listing
Modified Mon Oct 13 04:41:33 2014 UTC (3 years ago) by tudorache
added rdf:type in config of admin

Revision 27250 - Directory Listing
Modified Mon Oct 13 04:05:57 2014 UTC (3 years ago) by tudorache
added rdf:type for AllpropertiesPortlet

Revision 27249 - Directory Listing
Modified Mon Oct 13 02:52:03 2014 UTC (3 years ago) by nyulas
Committing three versions of the iCAT configuration for ICD, with slightly different layout. 

Revision 27248 - Directory Listing
Modified Mon Oct 13 01:10:18 2014 UTC (3 years ago) by nyulas
Preventing NullPointerException

Revision 27247 - Directory Listing
Modified Sun Oct 12 22:35:20 2014 UTC (3 years ago) by nyulas
Added option to control wether the toolbar should be shown or not in an IndividualsListPortlet, and any portlet that uses one, like an InstanceGridWidget or ScaleValueEditorWidget.

Revision 27245 - Directory Listing
Modified Sun Oct 12 20:36:01 2014 UTC (3 years ago) by nyulas
First complete draft of "Logical Definitions" tab configuration 

Revision 27243 - Directory Listing
Modified Sun Oct 12 15:53:37 2014 UTC (3 years ago) by nyulas
Added more widget to "Logical Definition" tab (still incomplete, but close to ready)

Revision 27238 - Directory Listing
Modified Sun Oct 12 11:03:53 2014 UTC (3 years ago) by nyulas
More configuration for pre-coordination tab (incomplete)

Revision 27237 - Directory Listing
Modified Sun Oct 12 10:50:49 2014 UTC (3 years ago) by tudorache
updated icd.jar

Revision 27236 - Directory Listing
Modified Sun Oct 12 10:47:24 2014 UTC (3 years ago) by nyulas
Added proper implementation for scale value selector.

Revision 27234 - Directory Listing
Modified Sat Oct 11 23:08:18 2014 UTC (3 years ago) by nyulas
Added logic to correctly deal with empty (i.e. unset or incorrectly set) root in ClassTreePortlet.

Revision 27233 - Directory Listing
Modified Sat Oct 11 22:02:37 2014 UTC (3 years ago) by nyulas
Fixed NullPointerException in case toolbar is not desired.

Revision 27228 - Directory Listing
Modified Mon Oct 6 21:54:09 2014 UTC (3 years ago) by nyulas
Reduced height of "Short Definition" for Chapter X, and activated Scales tab 

Revision 27226 - Directory Listing
Modified Mon Oct 6 21:30:50 2014 UTC (3 years ago) by nyulas
fixing bug with HTML comments.

Revision 27225 - Directory Listing
Modified Mon Oct 6 21:24:01 2014 UTC (3 years ago) by nyulas
Added lots of configuration for post-coordination.

Revision 27221 - Directory Listing
Modified Mon Oct 6 19:38:24 2014 UTC (3 years ago) by tudorache
updated icd.jar

Revision 27220 - Directory Listing
Modified Mon Oct 6 11:03:35 2014 UTC (3 years ago) by tudorache
Implemented a proper internal reference widget. 

Revision 27219 - Directory Listing
Modified Mon Oct 6 02:10:26 2014 UTC (3 years ago) by nyulas
Scale value editor widget is working properly,thanks to the implementation of the previously committed "copy if template" functionality.

Revision 27218 - Directory Listing
Modified Mon Oct 6 02:04:49 2014 UTC (3 years ago) by nyulas
Implemented a general mechanism for the copy_if_template option.
Note: The deletion of instances that were create from templates is not complete. 

Revision 27217 - Directory Listing
Modified Mon Oct 6 02:02:46 2014 UTC (3 years ago) by nyulas
Implemented a general mechanism for the copy_if_template option.
Note: The deletion of instances that were create from templates is not complete. 

Revision 27216 - Directory Listing
Modified Mon Oct 6 01:46:52 2014 UTC (3 years ago) by nyulas
Updated import statements to work with refactored content model API.


Revision 27214 - Directory Listing
Modified Mon Oct 6 01:22:58 2014 UTC (3 years ago) by nyulas
Updated certain iCAT services to work with new content model API, where we refactored the code accessing the ICD Content Model into a more general WHOFIC Content Model API (comprising the classes in the edu.stanford.bmir.whofic) , and two separate,more specialized APIs to access the ICD and the ICI content model. This change was key for building iCAT-ICI. 

Revision 27211 - Directory Listing
Modified Fri Oct 3 12:37:14 2014 UTC (3 years ago) by nyulas
Added support for empty text in InstanceGridWidget. The property  "empty_text" in the configuration file can be used to specify arbitrary text to be displayed for empty cell in a given column. The empty text can contain a reference to another column using "@ColumnN" where N is a column number.

Revision 27210 - Directory Listing
Modified Fri Oct 3 12:00:58 2014 UTC (3 years ago) by nyulas
Fixed SuperclassSelectorWidget to always show the correct list of superclasses in the drop down list. Earlier implementation showed an empty list (apparently due to a GWT-Ext  or Ext JS bug) when the drop down list was expanded for first time, and until selection of entity has not been changed.

Revision 27204 - Directory Listing
Modified Mon Sep 29 11:10:51 2014 UTC (3 years ago) by nyulas
Added style for CPT colored tab.

Revision 27195 - Directory Listing
Modified Wed Sep 10 07:10:12 2014 UTC (3 years, 1 month ago) by nyulas
Extended AllPropertiedGrid to allow editing of boolean property values.
WARNING: Apparently there is a bug somewhere (possibly in the Protege code), because if one tries to add  "False" to a boolean property value, the statement does not stuck. Workaround is to create a "True" value, then change that property value to "False".

Revision 27189 - Directory Listing
Modified Thu Sep 4 07:18:13 2014 UTC (3 years, 1 month ago) by nyulas
Added property-to-property map to fixed scale value presenter, so that enabling (showing) a given property can have an effect showing fixed scales for multiple properties. 

Revision 27188 - Directory Listing
Modified Thu Sep 4 07:09:10 2014 UTC (3 years, 1 month ago) by tudorache
new icd jar

Revision 27186 - Directory Listing
Modified Thu Sep 4 05:41:21 2014 UTC (3 years, 1 month ago) by tudorache
new icd jar

Revision 27171 - Directory Listing
Modified Tue Jul 22 23:57:59 2014 UTC (3 years, 3 months ago) by nyulas
Initial commit of code for pre-coordination support

Revision 27170 - Directory Listing
Modified Tue Jul 22 23:53:14 2014 UTC (3 years, 3 months ago) by nyulas
Fixing a bug during value removal from a field widget.

Revision 27169 - Directory Listing
Modified Tue Jul 22 23:07:18 2014 UTC (3 years, 3 months ago) by nyulas
Extracted some general functionalities of InstanceComboBox into the RemoteValueComboBox superclass, which can be subclassed by other widgets  (such as SuperclassSelectorWidget) that present remotely queried values in a combobox.

Revision 27168 - Directory Listing
Modified Tue Jul 22 19:59:42 2014 UTC (3 years, 3 months ago) by nyulas
Moved post-coordination related widgets to package dedicated for post- and pre-coordination.

Revision 27167 - Directory Listing
Modified Tue Jul 22 19:43:50 2014 UTC (3 years, 3 months ago) by nyulas
Cleaned up import statements.

Revision 27166 - Directory Listing
Modified Thu Jun 12 22:09:11 2014 UTC (3 years, 4 months ago) by tudorache
removed the stats portlet because we don't keep it up to date

Revision 27159 - Directory Listing
Modified Tue May 13 00:39:31 2014 UTC (3 years, 5 months ago) by nyulas
Improved layout for the "add value" (e.g. plus sign) icon.

Revision 27158 - Directory Listing
Modified Tue May 13 00:36:19 2014 UTC (3 years, 5 months ago) by nyulas
ClassSelectionFieldWidget can have top_class property specified.

Revision 27157 - Directory Listing
Modified Sat May 3 00:42:58 2014 UTC (3 years, 5 months ago) by nyulas
Enforced the implementation of setValues(...) method in the subclasses of AbstractPropertyWidget by declaring it "abstract".

Revision 27155 - Directory Listing
Modified Fri Apr 25 00:07:37 2014 UTC (3 years, 6 months ago) by tudorache
should have been committed with previous release

Revision 27154 - Directory Listing
Modified Fri Apr 25 00:06:28 2014 UTC (3 years, 6 months ago) by tudorache
the actual move

Revision 27153 - Directory Listing
Modified Fri Apr 25 00:05:37 2014 UTC (3 years, 6 months ago) by tudorache
moved the bp access class to the bp package

Revision 27152 - Directory Listing
Modified Thu Apr 24 23:26:42 2014 UTC (3 years, 6 months ago) by tudorache
refactored bioportal calls into BioPortalAccess service

Revision 27139 - Directory Listing
Modified Mon Mar 24 20:57:42 2014 UTC (3 years, 7 months ago) by tudorache
fix for authorization not working fine in widgets (users were not part of the writers group)

Revision 27138 - Directory Listing
Modified Sun Mar 23 04:18:52 2014 UTC (3 years, 7 months ago) by nyulas
Increased linearization widget height to be able to show the new ophthalmology linearization

Revision 27131 - Directory Listing
Modified Sat Mar 22 05:41:52 2014 UTC (3 years, 7 months ago) by tudorache
fixed a npe for the logger in icd.jar

Revision 27129 - Directory Listing
Modified Fri Mar 21 20:37:31 2014 UTC (3 years, 7 months ago) by tudorache
updating icd.jar on 2014/03/21, rev. 27126

Revision 27128 - Directory Listing
Modified Fri Mar 21 18:58:02 2014 UTC (3 years, 7 months ago) by tudorache
moved the logic for supporting or not the sibling ordering in the content model

Revision 27106 - Directory Listing
Modified Fri Mar 7 01:33:15 2014 UTC (3 years, 7 months ago) by nyulas
Removed unnecessary code (most remarkably the part that was double activating/deactivating the displaying  of the fixed value sets).
Renamed "fixedscalevalues-values" CSS class to "fixedscalevalues-table".

Revision 27105 - Directory Listing
Modified Fri Mar 7 00:46:35 2014 UTC (3 years, 7 months ago) by nyulas
Added implementation of the FixedScaleValuePresenterWidget, which can be used to present fixed scale values of possible ICD post-coordination axes.

Revision 27085 - Directory Listing
Modified Wed Feb 26 08:50:52 2014 UTC (3 years, 7 months ago) by nyulas
Added editing permissions for ObsoleteEditors and LinearizationEditors groups for the isObsolete flag respectively for the linearization specifications .

Revision 26964 - Directory Listing
Modified Wed Jan 22 22:16:22 2014 UTC (3 years, 9 months ago) by tudorache
added also a tab for classes overview with the all properties portlet

Revision 26963 - Directory Listing
Modified Wed Jan 22 22:10:22 2014 UTC (3 years, 9 months ago) by tudorache
an admin config that can be useful for debugging and demo. currently it contains an admin tab, which shows the sibling index

Revision 26962 - Directory Listing
Modified Wed Jan 22 19:47:35 2014 UTC (3 years, 9 months ago) by tudorache
removed the sorting label

Revision 26961 - Directory Listing
Modified Wed Jan 22 18:58:44 2014 UTC (3 years, 9 months ago) by tudorache
new icd.jar

Revision 26954 - Directory Listing
Modified Tue Jan 21 20:54:20 2014 UTC (3 years, 9 months ago) by tudorache
Taking out the sorting label from the class creation dialog

Revision 26953 - Directory Listing
Modified Sat Jan 18 02:05:40 2014 UTC (3 years, 9 months ago) by nyulas
Added support for restricting through configuration what properties are visible/available in PropertyTreePortlet and AllPropertiesGridPortlet.

Revision 26951 - Directory Listing
Modified Fri Jan 17 23:00:37 2014 UTC (3 years, 9 months ago) by tudorache
changes for sibling reordering

Revision 26947 - Directory Listing
Modified Thu Jan 16 17:04:41 2014 UTC (3 years, 9 months ago) by nyulas
initial commit of scale editor

Revision 26946 - Directory Listing
Modified Thu Jan 16 06:32:49 2014 UTC (3 years, 9 months ago) by nyulas
Added new color scheme for yellow tabs.

Revision 26945 - Directory Listing
Modified Thu Jan 16 01:12:59 2014 UTC (3 years, 9 months ago) by nyulas
Fixed bug related to previous commit (supporting "types_all" and "types_not")

Revision 26944 - Directory Listing
Modified Wed Jan 15 07:31:00 2014 UTC (3 years, 9 months ago) by nyulas
Added support for "types_all" and "types_not" filters (in addition to "types_any").

Revision 26943 - Directory Listing
Modified Tue Jan 14 00:55:30 2014 UTC (3 years, 9 months ago) by nyulas
Minor clean-up of previous revision.

Revision 26941 - Directory Listing
Modified Tue Jan 14 00:23:09 2014 UTC (3 years, 9 months ago) by nyulas
Fixed PostCoordinationGrid widget to activate the right scale selection widget when iCAT is configured correctly.

Revision 26940 - Directory Listing
Modified Tue Jan 14 00:22:31 2014 UTC (3 years, 9 months ago) by nyulas
Clean-up

Revision 26936 - Directory Listing
Modified Fri Jan 10 07:25:37 2014 UTC (3 years, 9 months ago) by nyulas
Reverting to the content in revision 26934

Revision 26935 - Directory Listing
Modified Fri Jan 10 07:15:23 2014 UTC (3 years, 9 months ago) by nyulas
Committed only for FUTURE REFERENCE. We are NOT planning to use these changes any time soon.
This revision provides a solution for adding property values for a subject (for example through the instance grid widget and its subclasses) that is a shallow copy of the selected "new value" instance. This seems to be very inefficient, especially with DB back-end.

Revision 26934 - Directory Listing
Modified Fri Jan 10 06:30:12 2014 UTC (3 years, 9 months ago) by nyulas
Enhanced implementation of MultilevelInstanceGridWidget.
In this version it is possible to have multiple rows returned for a given property value on the selected subject. This happens in the case when subsequent ("lower level") reified properties refer to a property value that contains multiple instances. Unlike in the previous revision, in this implementation reified properties are expanded on all values in the  "subject_column_index" column.

Revision 26933 - Directory Listing
Modified Fri Jan 10 06:26:05 2014 UTC (3 years, 9 months ago) by nyulas
Enhanced implementation of MultilevelInstanceGridWidget.
In this version it is possible to have multiple rows returned for a given property value on the selected subject. This happens in the case when subsequent ("lower level") reified properties refer to a property value that contains multiple instances. Unlike in the previous revision, in this implementation reified properties are expanded on all values in the  "subject_column_index" column.

Revision 26932 - Directory Listing
Modified Thu Dec 19 07:26:40 2013 UTC (3 years, 10 months ago) by nyulas
Minor: refactor code for readability. 
Does exactly the same as the previous revision, but provides a base for upcoming changes that will be easier to compare.

Revision 26931 - Directory Listing
Modified Thu Dec 19 07:01:13 2013 UTC (3 years, 10 months ago) by nyulas
Clean-up. Removed comments that were explaining changes in previous revision compared to the revision before that.

Revision 26930 - Directory Listing
Modified Thu Dec 19 06:44:23 2013 UTC (3 years, 10 months ago) by nyulas
Initial implementation of MultilevelInstanceGridWidget.
In this version only one row is returned for each distinct property value on the selected subject. Subsequent ("lower level") properties are expanded on the first value in the  "subject_column_index" column.

Revision 26929 - Directory Listing
Modified Tue Dec 17 23:29:29 2013 UTC (3 years, 10 months ago) by nyulas
not a proper branch

Revision 26928 - Directory Listing
Modified Tue Dec 17 23:15:16 2013 UTC (3 years, 10 months ago) by nyulas


Revision 26925 - Directory Listing
Modified Tue Dec 10 20:09:26 2013 UTC (3 years, 10 months ago) by tudorache
double-clicking on an instance or class value will bring up a window with the properties for that entity. this will make editing and navigation much easier.

Revision 26910 - Directory Listing
Modified Thu Nov 21 17:56:55 2013 UTC (3 years, 11 months ago) by tudorache
Fixed a number of things, including some race conditions:
- the session stores now the user as a string, not object
- fixed some of the log in and log out methods that did not set the session correctly
- renamed some of the constants in AuthenticationConstants to make more clear what they are for

Revision 26909 - Directory Listing
Modified Thu Nov 21 17:48:13 2013 UTC (3 years, 11 months ago) by tudorache
fix typo

Revision 26908 - Directory Listing
Modified Thu Nov 21 17:47:47 2013 UTC (3 years, 11 months ago) by tudorache
nothing really, just formatting to make the code more understandable

Revision 26905 - Directory Listing
Modified Fri Nov 8 22:38:36 2013 UTC (3 years, 11 months ago) by nyulas
This version is based on revision 25636 (the last one before the post-coordination), and was created to work with the iCAT release from Nov 18, 2013.

Revision 26904 - Directory Listing
Modified Fri Nov 8 22:16:23 2013 UTC (3 years, 11 months ago) by nyulas
THIS IS AN INTERMEDIARY VERSION, DO NOT USE IT!
It contains references to widgets under development, which will not work with the rest of the code as it is committed.

Revision 26903 - Directory Listing
Modified Fri Nov 8 21:30:56 2013 UTC (3 years, 11 months ago) by nyulas
Added support for field label width in forms

Revision 26902 - Directory Listing
Modified Fri Nov 8 19:56:39 2013 UTC (3 years, 11 months ago) by tudorache
new icd.jar with residuals

Revision 26900 - Directory Listing
Modified Fri Nov 8 19:50:53 2013 UTC (3 years, 11 months ago) by tudorache
added a log message when user in session is null, which should not happen

Revision 26899 - Directory Listing
Modified Fri Nov 8 19:25:14 2013 UTC (3 years, 11 months ago) by tudorache
updated temporarily icd.jar

Revision 26898 - Directory Listing
Modified Wed Nov 6 19:38:47 2013 UTC (3 years, 11 months ago) by tudorache
reverted the code that added support for sibling reordering. It was committed before before being ready

Revision 26897 - Directory Listing
Modified Tue Nov 5 19:26:55 2013 UTC (3 years, 11 months ago) by tudorache
updated GWT version

Revision 26896 - Directory Listing
Modified Tue Nov 5 04:56:50 2013 UTC (3 years, 11 months ago) by nyulas
Replaced  AuthenticationConstants.USERDATA_OBJECT with SessionConstants.USER_DATA_PARAMETER everywhere.
This should FIX the bug that caused erroneous recording of the author of given operations (such as changing the type of base index terms in iCAT), when the user logged in with openId.

Revision 26884 - Directory Listing
Modified Wed Aug 21 21:56:26 2013 UTC (4 years, 2 months ago) by tudorache
added methods for reordering siblings - work in progress not ready yet

Revision 26882 - Directory Listing
Modified Wed Aug 21 01:27:46 2013 UTC (4 years, 2 months ago) by nyulas
Deprecation note added since ICDInclusionWidget is not used in iCAT.

Revision 26881 - Directory Listing
Modified Wed Aug 14 22:33:09 2013 UTC (4 years, 2 months ago) by nyulas
Added support for in-cell warning to InstanceGridWidget.
This feature is used to highlight the radio buttons in ICDIndexWidget for base index terms that do not have any type selected.

Revision 26867 - Directory Listing
Modified Thu Aug 8 08:30:38 2013 UTC (4 years, 2 months ago) by nyulas
Clean-up

Revision 26866 - Directory Listing
Modified Thu Aug 8 07:23:15 2013 UTC (4 years, 2 months ago) by nyulas
Added support for dynamic showing/hiding widgets dynamically based on selections in the PostCoordinationGrid.

Revision 26697 - Directory Listing
Modified Thu Jun 13 17:58:49 2013 UTC (4 years, 4 months ago) by nyulas
minor: improved operation description for adding removing post-coordination axes.

Revision 26696 - Directory Listing
Modified Thu Jun 13 17:50:59 2013 UTC (4 years, 4 months ago) by nyulas
Updated post-coordination widget configuration: added injury specific and "associated with" post-coordination axes, and removed "severity" and "diagnosis confirmed by" axes for external causes.

Revision 26695 - Directory Listing
Modified Thu Jun 13 08:45:01 2013 UTC (4 years, 4 months ago) by nyulas
Added preliminary configuration of post-coordination tab for external causes.

Revision 26694 - Directory Listing
Modified Thu Jun 13 06:38:04 2013 UTC (4 years, 4 months ago) by nyulas
Clean-up

Revision 26693 - Directory Listing
Modified Thu Jun 13 06:15:48 2013 UTC (4 years, 4 months ago) by tudorache
new version of icd.jar

Revision 26690 - Directory Listing
Modified Thu Jun 13 06:02:49 2013 UTC (4 years, 4 months ago) by nyulas
Added implementation of PostCoordinationGrid.
As a side effect, we added support for cloned columns, column header CSS, cell background color, options for specifying whether a column is "sortable" or has no header menu, and three way check boxes.

Revision 26689 - Directory Listing
Modified Thu Jun 13 01:44:29 2013 UTC (4 years, 4 months ago) by nyulas
preliminary tidying up before committing work on PostCoordinationGrid

Revision 26623 - Directory Listing
Modified Wed May 22 18:41:47 2013 UTC (4 years, 5 months ago) by tudorache
clean up

Revision 26581 - Directory Listing
Modified Fri May 10 06:28:59 2013 UTC (4 years, 5 months ago) by tudorache
started adding example for configuration of forms

Revision 26580 - Directory Listing
Modified Fri May 10 06:28:00 2013 UTC (4 years, 5 months ago) by tudorache
fix for a selection problem

Revision 26579 - Directory Listing
Modified Fri May 10 04:22:11 2013 UTC (4 years, 5 months ago) by tudorache
Rename to add the date

Revision 26578 - Directory Listing
Modified Fri May 10 04:20:13 2013 UTC (4 years, 5 months ago) by tudorache
Tag for WebProtege 1.0 release from April 25, 2013.
Release notes:
http://protegewiki.stanford.edu/wiki/WebProtegeReleaseNotes#WebProtege_1.0_Final_Release_.28April_25.2C_2013.29

Revision 26440 - Directory Listing
Modified Thu Apr 25 08:24:35 2013 UTC (4 years, 6 months ago) by tudorache
minor fixes

Revision 26439 - Directory Listing
Modified Thu Apr 25 07:34:02 2013 UTC (4 years, 6 months ago) by tudorache
added a notification panel in TopPanel as a html page

Revision 26438 - Directory Listing
Modified Thu Apr 25 05:48:40 2013 UTC (4 years, 6 months ago) by tudorache
changed feedback text to match WP

Revision 26437 - Directory Listing
Modified Thu Apr 25 05:40:06 2013 UTC (4 years, 6 months ago) by tudorache
minor

Revision 26436 - Directory Listing
Modified Thu Apr 25 05:39:44 2013 UTC (4 years, 6 months ago) by tudorache
refactored logout in multiple methods

Revision 26232 - Directory Listing
Modified Thu Apr 4 21:37:23 2013 UTC (4 years, 6 months ago) by tudorache
- added support for logging in with the email address
- MetaProjectManager:
  - added getUser(nameOrEmail)
  - removed getUserSalt - not needed

Revision 26231 - Directory Listing
Modified Thu Apr 4 21:35:21 2013 UTC (4 years, 6 months ago) by tudorache
remove some commented code

Revision 26230 - Directory Listing
Modified Thu Apr 4 20:57:53 2013 UTC (4 years, 6 months ago) by tudorache
try to load ChAO only if needed

Revision 26228 - Directory Listing
Modified Wed Apr 3 21:47:43 2013 UTC (4 years, 6 months ago) by tudorache
minor, just formatting

Revision 26222 - Directory Listing
Modified Mon Apr 1 21:46:09 2013 UTC (4 years, 6 months ago) by tudorache
temporary fix for vertical scrollbar issue in menues

Revision 26215 - Directory Listing
Modified Fri Mar 22 22:20:58 2013 UTC (4 years, 7 months ago) by tudorache
minor fix for the title is current entity is null

Revision 26178 - Directory Listing
Modified Fri Mar 15 06:09:53 2013 UTC (4 years, 7 months ago) by tudorache
- added a new property: who.service.system.name; valid properties: iCat or iCatTM (case sensitive)
- changed the default WHO service URL for ICD

Revision 26160 - Directory Listing
Modified Fri Mar 8 21:07:51 2013 UTC (4 years, 7 months ago) by tudorache
updated the WHO ID service to point to the service for ICD-11

Revision 26148 - Directory Listing
Modified Fri Mar 8 01:51:29 2013 UTC (4 years, 7 months ago) by tudorache
- when creating instances, add also the type in the returned entity data
- getSubProperties also includes now rdfs:seeAlso, and rdfs:isDefinedBy
- getIndividuals also include now the types of the individuals, so that we can create different forms based on the types

Revision 26147 - Directory Listing
Modified Fri Mar 8 01:49:26 2013 UTC (4 years, 7 months ago) by tudorache
added check for masking

Revision 26146 - Directory Listing
Modified Fri Mar 8 01:48:14 2013 UTC (4 years, 7 months ago) by tudorache
removed a check when creating new properties

Revision 26145 - Directory Listing
Modified Fri Mar 8 01:47:21 2013 UTC (4 years, 7 months ago) by tudorache
moved isSystem flag and methods to EntityData from PropertyEntityData

Revision 26144 - Directory Listing
Modified Fri Mar 8 01:23:00 2013 UTC (4 years, 7 months ago) by tudorache
changed metadata

Revision 26143 - Directory Listing
Modified Fri Mar 8 01:22:29 2013 UTC (4 years, 7 months ago) by tudorache
changed metadata

Revision 26141 - Directory Listing
Modified Fri Mar 8 01:21:10 2013 UTC (4 years, 7 months ago) by tudorache
changed metadata

Revision 26140 - Directory Listing
Modified Fri Mar 8 01:20:33 2013 UTC (4 years, 7 months ago) by tudorache
change metadata

Revision 26139 - Directory Listing
Modified Fri Mar 8 01:19:41 2013 UTC (4 years, 7 months ago) by tudorache
added the who api key

Revision 26136 - Directory Listing
Modified Thu Mar 7 20:52:10 2013 UTC (4 years, 7 months ago) by tudorache
fix for note counts

Revision 26135 - Directory Listing
Modified Thu Mar 7 19:29:04 2013 UTC (4 years, 7 months ago) by tudorache
updated stats for 6 March, 2013

Revision 26134 - Directory Listing
Modified Thu Mar 7 06:22:50 2013 UTC (4 years, 7 months ago) by nyulas
Fixed a bug that caused ChAOStatsServiceImpl, which is used for example by the ChangesTablePortlet, to always return empty list of changes.

Revision 26131 - Directory Listing
Modified Thu Mar 7 05:41:40 2013 UTC (4 years, 7 months ago) by tudorache
removed unneeded stuff

Revision 26122 - Directory Listing
Modified Thu Mar 7 01:09:55 2013 UTC (4 years, 7 months ago) by nyulas
Added "apply to" entity to changes in ChangePortlet and related code

Revision 26117 - Directory Listing
Modified Wed Mar 6 22:25:09 2013 UTC (4 years, 7 months ago) by tudorache
added null check

Revision 26116 - Directory Listing
Modified Wed Mar 6 22:07:54 2013 UTC (4 years, 7 months ago) by tudorache
added the public id when retrieving the subclasses or creating a new class

Revision 26115 - Directory Listing
Modified Wed Mar 6 22:07:15 2013 UTC (4 years, 7 months ago) by tudorache
using lowercase for the JSON properties in the WHO services

Revision 26114 - Directory Listing
Modified Wed Mar 6 22:06:34 2013 UTC (4 years, 7 months ago) by tudorache
using uppercase for the context menu items

Revision 26113 - Directory Listing
Modified Wed Mar 6 22:06:17 2013 UTC (4 years, 7 months ago) by tudorache
added the show public id context menu to the classes

Revision 26112 - Directory Listing
Modified Tue Mar 5 22:47:38 2013 UTC (4 years, 7 months ago) by tudorache
removed bad import that made the GWT compile fail

Revision 26111 - Directory Listing
Modified Tue Mar 5 22:34:33 2013 UTC (4 years, 7 months ago) by tudorache
seems that commons-logging is needed now..

Revision 26110 - Directory Listing
Modified Tue Mar 5 22:34:19 2013 UTC (4 years, 7 months ago) by tudorache
added the Google JSON lib (gson)

Revision 26109 - Directory Listing
Modified Tue Mar 5 22:33:57 2013 UTC (4 years, 7 months ago) by tudorache
new version of the ICD content model that includes methods for the public ID

Revision 26108 - Directory Listing
Modified Tue Mar 5 22:33:13 2013 UTC (4 years, 7 months ago) by tudorache
when creating a new ICD class, add also the publicId by calling the WHO service

Revision 26063 - Directory Listing
Modified Tue Feb 26 20:16:35 2013 UTC (4 years, 7 months ago) by nyulas
Added detailed view of changes, activated by double-click

Revision 26025 - Directory Listing
Modified Sun Feb 17 18:43:59 2013 UTC (4 years, 8 months ago) by nyulas
Added external link to ICD-11 Beeta Browser in the ICDClassTreePortlet's context menu

Revision 26024 - Directory Listing
Modified Sun Feb 17 18:37:37 2013 UTC (4 years, 8 months ago) by nyulas
This belongs to the previous commit

Revision 26018 - Directory Listing
Modified Sat Feb 16 00:08:46 2013 UTC (4 years, 8 months ago) by nyulas
Added support for easier configuration of the home page message (which appears before a user is logged in) through an external HTML file (called home_page.html)

Revision 26016 - Directory Listing
Modified Tue Feb 12 22:44:02 2013 UTC (4 years, 8 months ago) by nyulas
Changed contact person information from Sara Cottler to Can Celik

Revision 25773 - Directory Listing
Modified Wed Oct 10 04:23:20 2012 UTC (5 years ago) by tudorache
setting the BP REST base on all components when the user changes the configuration

Revision 25772 - Directory Listing
Modified Wed Oct 10 04:22:41 2012 UTC (5 years ago) by tudorache
implementing RemoteService.. forgot about this one before

Revision 25771 - Directory Listing
Modified Wed Oct 10 02:21:56 2012 UTC (5 years ago) by tudorache
added the virtual ontology id in the upload ontology method, so that we can upload also new versions of ontologies

Revision 25769 - Directory Listing
Modified Tue Oct 9 20:14:19 2012 UTC (5 years ago) by tudorache
fixed categories -> categoryIds

Revision 25766 - Directory Listing
Modified Tue Oct 9 06:40:10 2012 UTC (5 years ago) by tudorache
added the BioPortal Upload servlet (service, manager, impl)

Revision 25647 - Directory Listing
Modified Thu Sep 27 18:18:09 2012 UTC (5 years ago) by tudorache
fix for class icon used to render entities which are values of properties

Revision 25640 - Directory Listing
Modified Wed Sep 26 21:42:03 2012 UTC (5 years ago) by tudorache
implemented access control for move an create class that can be controlled from the metaproject with the CreateClass and MoveClass operations. The class tree panel and the manage hierarchy tab use this access control. If move is not allowed, drag-n-drop is disabled in the class tree.

Revision 25636 - Directory Listing
Modified Wed Sep 26 18:56:03 2012 UTC (5 years ago) by tudorache
Restrict editing of linearizations to WHO and Stanford teams. Requested by WHO for the beta phase.

Revision 25625 - Directory Listing
Modified Tue Sep 25 17:48:58 2012 UTC (5 years ago) by tudorache
updated the welcome message

Revision 25582 - Directory Listing
Modified Wed Sep 19 20:15:29 2012 UTC (5 years, 1 month ago) by tudorache
removed ICD from the projects in the metaproject

Revision 25581 - Directory Listing
Modified Wed Sep 19 20:12:02 2012 UTC (5 years, 1 month ago) by tudorache
fixed path for twitter.hml in the config of collab pizza project. paths should either be absolute, or relative to the root of the webapp.

Revision 25516 - Directory Listing
Modified Fri Aug 24 21:40:45 2012 UTC (5 years, 2 months ago) by tudorache
The add entity link would load the home page. Fixed the anchor. Thank you to Philip Yeo for providing the fix: https://mailman.stanford.edu/pipermail/protege-discussion/2011-November/005481.html

Revision 25339 - Directory Listing
Modified Thu Jul 26 17:33:34 2012 UTC (5 years, 2 months ago) by nyulas
Removed the word "beta" from the reference to the ICD-11 CM Ref. Guide.

Revision 25334 - Directory Listing
Modified Wed Jul 25 23:46:26 2012 UTC (5 years, 3 months ago) by nyulas
Fixing the layout of the statistics once again.

Revision 25333 - Directory Listing
Modified Wed Jul 25 23:17:27 2012 UTC (5 years, 3 months ago) by nyulas
Some more fixes for the layout of the statistics information.

Revision 25331 - Directory Listing
Modified Wed Jul 25 22:55:48 2012 UTC (5 years, 3 months ago) by nyulas
Fixed layout of statistics screen shots, because it was not rendered properly in Chrome.

Revision 25330 - Directory Listing
Modified Wed Jul 25 21:44:01 2012 UTC (5 years, 3 months ago) by nyulas
Updated welcome page to say "beta" instead of "alpha" and to point to the latest ICD CM (dating from January 2011).

Revision 25322 - Directory Listing
Modified Sun Jul 22 04:10:09 2012 UTC (5 years, 3 months ago) by tudorache
stats as of July 21, 2012

Revision 25321 - Directory Listing
Modified Sun Jul 22 03:50:00 2012 UTC (5 years, 3 months ago) by tudorache
stats as of July 21, 2012

Revision 25291 - Directory Listing
Modified Thu Jul 12 20:54:43 2012 UTC (5 years, 3 months ago) by tudorache
added support for downloading OWL ontologies in the OntologiesPortlet using the native writer

Revision 25197 - Directory Listing
Modified Fri Jun 8 20:34:42 2012 UTC (5 years, 4 months ago) by tredmond
Moving the who branch to the trunk of the icat project.

Revision 25196 - Directory Listing
Modified Fri Jun 8 20:34:24 2012 UTC (5 years, 4 months ago) by tredmond
Moving the who branch to the trunk of the icat project.

Revision 25195 - Directory Listing
Modified Fri Jun 8 20:33:51 2012 UTC (5 years, 4 months ago) by tredmond
tagging the trunk to keep track of the axiome work and the swrl work that exists there but nowhere else.

Revision 25194 - Directory Listing
Modified Fri Jun 8 20:33:25 2012 UTC (5 years, 4 months ago) by tredmond
tagging the trunk to keep track of the axiome work and the swrl work that exists there but nowhere else.

Revision 25188 - Directory Listing
Modified Fri Jun 8 20:29:05 2012 UTC (5 years, 4 months ago) by tredmond
Copied from: web-protege revision 25187
Refactoring the who version of web-protege so that there is a trunk.

Revision 25186 - Directory Listing
Modified Fri Jun 8 19:57:09 2012 UTC (5 years, 4 months ago) by tudorache
Original Path: web-protege
adding the check box widget - might not work perfect

Revision 24935 - Directory Listing
Modified Thu Apr 5 06:36:30 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
added removeBaseIndexTerm

Revision 24934 - Directory Listing
Modified Thu Apr 5 06:36:13 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
made internal class protected

Revision 24933 - Directory Listing
Modified Thu Apr 5 06:35:15 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
added removeBaseIndexTerm

Revision 24932 - Directory Listing
Modified Thu Apr 5 06:34:39 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
overwritten onDelete to call ICD method

Revision 24931 - Directory Listing
Modified Thu Apr 5 06:34:19 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
added removeBaseIndexTerm

Revision 24930 - Directory Listing
Modified Wed Apr 4 21:45:16 2012 UTC (5 years, 6 months ago) by tredmond
Original Path: web-protege
updated to include the latest class loader fix from the icd

Revision 24880 - Directory Listing
Modified Thu Mar 29 07:29:16 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
Minor: fixed transaction string

Revision 24879 - Directory Listing
Modified Thu Mar 29 07:15:14 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
fix for transaction string

Revision 24878 - Directory Listing
Modified Thu Mar 29 06:25:11 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Added operation description to the changeIndexType and changeInclusionFlagForIndex methods.

Revision 24877 - Directory Listing
Modified Thu Mar 29 06:09:29 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
enclosed two of the index methods in transactions and added operation description

Revision 24876 - Directory Listing
Modified Thu Mar 29 05:38:30 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Updated tooltips for terms.

Revision 24873 - Directory Listing
Modified Thu Mar 29 04:43:00 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
fix for the combobox editor: send back the real name, not the browser text at a replace

Revision 24858 - Directory Listing
Modified Wed Mar 28 10:54:43 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Added support for flexible field editor, and fixed InstanceGridWidget to have the "inline" field editor be the default one.

Revision 24857 - Directory Listing
Modified Wed Mar 28 10:50:18 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Added configurations for multiline and inline field editing.

Revision 24856 - Directory Listing
Modified Wed Mar 28 06:54:22 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Reconfigured Terms tab, added Parents portlet to all tabs.

Revision 24853 - Directory Listing
Modified Wed Mar 28 04:37:16 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Added support for flexible top class in the class selection widget, specified by the configuration: topClass = @entity@.

Revision 24852 - Directory Listing
Modified Wed Mar 28 03:53:41 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
honoring the default class tree from the class tree factory for class selection

Revision 24851 - Directory Listing
Modified Wed Mar 28 03:52:55 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
factory to return the default class tree portlet. it is manually written now, but should be automatically generated later

Revision 24850 - Directory Listing
Modified Wed Mar 28 03:52:26 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
added util method

Revision 24848 - Directory Listing
Modified Wed Mar 28 03:12:29 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
removed from superclass a field, some other minor refactoring

Revision 24847 - Directory Listing
Modified Wed Mar 28 03:11:37 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
- added option for default column to edit when creating a new instance
- modularized createColumn
- refactored some methods

Revision 24827 - Directory Listing
Modified Tue Mar 27 06:58:02 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
checking for null in replacePropertyValue

Revision 24826 - Directory Listing
Modified Tue Mar 27 06:57:32 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
added a shadow store that keeps the grid as entity data. this is a workaround for a bug in gwt-ext that doesn't allow us to have custom renderers on object type fields. This is a pain, and there is both a performance and a memory cost to it.

Revision 24825 - Directory Listing
Modified Tue Mar 27 06:05:54 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege
Minor change, just to add MISSING COMMENT FOR PREVIOUS COMMIT:
- added support for deletion of instance and class property values through context menu.

Revision 24824 - Directory Listing
Modified Tue Mar 27 05:58:52 2012 UTC (5 years, 6 months ago) by nyulas
Original Path: web-protege


Revision 24823 - Directory Listing
Modified Mon Mar 26 21:20:34 2012 UTC (5 years, 6 months ago) by tudorache
Original Path: web-protege
initial import in SVN. Logging jars needed by Jena.

Revision 24821 - Directory Listing
Modified Mon Mar 26 09:13:17 2012 UTC (5 years, 7 months ago) by tudorache
Original Path: web-protege
added field type: class and instance and made generic browser and editor for these column types. Still to do: delete.

Revision 24820 - Directory Listing
Modified Mon Mar 26 06:01:12 2012 UTC (5 years, 7 months ago) by nyulas
Original Path: web-protege
Not necessarily in stable state, but committed in order to allow parallel others to edit it. 
Main changes: 
- adapting even more methods from ICDLinearizationWidget;
- changing "parent" to "icdCategory";
- added popup window "select classes"

Revision 24819 - Directory Listing
Modified Mon Mar 26 05:39:26 2012 UTC (5 years, 7 months ago) by nyulas
Original Path: web-protege
Rearranged code (no functionality change)

Revision 24624 - Directory Listing
Modified Tue Mar 6 01:19:07 2012 UTC (5 years, 7 months ago) by nyulas
Original Path: web-protege
Added HTML file with instruction for temporarily disabling editing in (the "Terms") tab.

Revision 24461 - Directory Listing
Modified Fri Feb 24 00:08:15 2012 UTC (5 years, 8 months ago) by tudorache
Original Path: web-protege
point to the OWL-API impl of OntologyServiceImpl (temporarily until we have the final solution)

Revision 24460 - Directory Listing
Modified Thu Feb 23 23:59:32 2012 UTC (5 years, 8 months ago) by tudorache
Original Path: web-protege
imports

Revision 24459 - Directory Listing
Modified Thu Feb 23 23:11:02 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
removed unused jars

Revision 24458 - Directory Listing
Modified Thu Feb 23 23:01:15 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
removed the custom OWL-API

Revision 24439 - Directory Listing
Modified Fri Feb 17 03:17:29 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
Fixed bug generating invalid change event descriptions in the InstanceRadioButtonWidget subclass, such as "Set PropX for EntY. Old value: Yes. New Value: Yes". 

Explanation: Because previously the internal state of the widget was not set properly at the time of every load (such as at subject changed), the InstanceRadioButtonWidget thought that the "old value" is the last value which was set using this widget on the previously changed subject entity.

Revision 24320 - Directory Listing
Modified Thu Feb 2 07:45:58 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
Added support for configurable labels for "add/replace new/existing value" links also in ReferenceFieldWidget and ClassInstanceReferenceFieldWidget.

Revision 24319 - Directory Listing
Modified Thu Feb 2 06:25:33 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
Minor: fixing a property name for the label of the "Replace with new value" link

Revision 24318 - Directory Listing
Modified Thu Feb 2 01:05:27 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
Added support for grid cell value editing using simple text and html text pop-ups.

Revision 24317 - Directory Listing
Modified Thu Feb 2 00:23:50 2012 UTC (5 years, 8 months ago) by nyulas
Original Path: web-protege
Avoiding improbable NullPointerException.

Revision 24187 - Directory Listing
Modified Fri Jan 27 16:03:05 2012 UTC (5 years, 8 months ago) by tredmond
Original Path: web-protege
plugin information file for when generated code is really generated

Revision 24123 - Directory Listing
Modified Tue Jan 17 00:34:13 2012 UTC (5 years, 9 months ago) by nyulas
Original Path: web-protege
Added write access to the content of the "ICD-10 Linearizations" tab to the members of the newly created ICD10Editors user group.

Revision 23958 - Directory Listing
Modified Tue Nov 29 22:35:08 2011 UTC (5 years, 10 months ago) by tredmond
Original Path: web-protege
working for a consistent predictable build.  This may need some refinement later.

Revision 23957 - Directory Listing
Modified Tue Nov 29 21:43:53 2011 UTC (5 years, 10 months ago) by tredmond
Original Path: web-protege
Added eclipse plugin files.


Revision 23956 - Directory Listing
Modified Tue Nov 29 00:49:51 2011 UTC (5 years, 10 months ago) by tredmond
Original Path: web-protege
getting the build targets to work

Revision 23931 - Directory Listing
Modified Sat Nov 12 02:15:23 2011 UTC (5 years, 11 months ago) by nyulas
Original Path: web-protege
Added support for BioPortal API key for the search in BioPortal Reference widget (borrowing the solution from the WHO branch). 
Note: We did not check systematically whether all BioProtal calls have been enhanced with the support for API Key! This is something to be done!

Revision 23878 - Directory Listing
Modified Thu Oct 13 22:51:11 2011 UTC (6 years ago) by vendetti
Original Path: web-protege
Fixed some unused imports warnings.

Revision 23877 - Directory Listing
Modified Thu Oct 13 22:50:35 2011 UTC (6 years ago) by vendetti
Original Path: web-protege
Assigned a value to the load-on-startup element for the NotificationSchedulerServlet.  Having an empty element of this type causes WebProtege to fail to deploy on Tomcat 7.

Revision 23866 - Directory Listing
Modified Tue Oct 11 00:22:11 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
- New feature: Also the notes' body will be part of the email notifications
- Fixed functionality: Email notifications will be sent also for notes that are inside threaded discussions (i.e. replies to existing notes) for all classes in watched branches
- Improved performance by eliminating the creation of redundant NotificationChangeData objects

Revision 23865 - Directory Listing
Modified Thu Oct 6 18:48:07 2011 UTC (6 years ago) by saeedhp
Original Path: web-protege


Revision 23864 - Directory Listing
Modified Thu Oct 6 18:07:11 2011 UTC (6 years ago) by saeedhp
Original Path: web-protege


Revision 23863 - Directory Listing
Modified Thu Oct 6 18:06:31 2011 UTC (6 years ago) by saeedhp
Original Path: web-protege


Revision 23846 - Directory Listing
Modified Tue Oct 4 18:33:40 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
Fixed group access rights (renamed "WHO" to "WHOTeam", added "Stanford" where it seemed to be a good idea) and fixed hints for ICD-10 specific linearizations and tabulation lists

Revision 23836 - Directory Listing
Modified Mon Oct 3 21:48:13 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
Minor: Fixing the rest of the "ICD10" and "ICD 10" in labels to "ICD-10"

Revision 23835 - Directory Listing
Modified Sat Oct 1 05:53:16 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
Minor fix on the label of "ICD-10 Notes&Hints" and "ICD-10 Linearizations" headers

Revision 23827 - Directory Listing
Modified Fri Sep 30 05:41:23 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
Support for hidden columns in InstanceGridWidget

Revision 23823 - Directory Listing
Modified Fri Sep 30 02:50:07 2011 UTC (6 years ago) by tudorache
Original Path: web-protege
updated icd.jar

Revision 23815 - Directory Listing
Modified Thu Sep 29 22:43:39 2011 UTC (6 years ago) by tudorache
Original Path: web-protege
add the oboslete flag when sending back the subclass data

Revision 23814 - Directory Listing
Modified Thu Sep 29 22:43:09 2011 UTC (6 years ago) by tudorache
Original Path: web-protege
showing the obsolete categories differently

Revision 23813 - Directory Listing
Modified Thu Sep 29 22:42:54 2011 UTC (6 years ago) by tudorache
Original Path: web-protege
refactored some methods for creating the tree node to make it more extensible

Revision 23812 - Directory Listing
Modified Thu Sep 29 22:42:12 2011 UTC (6 years ago) by tudorache
Original Path: web-protege
added tooltip for isObsolete

Revision 23800 - Directory Listing
Modified Thu Sep 29 18:35:20 2011 UTC (6 years ago) by nyulas
Original Path: web-protege
Added configuration for "ICD10 Linearizations" tab, and the isObsolete flag on the "Title & Definition" tab.

Revision 23782 - Directory Listing
Modified Wed Sep 28 22:10:19 2011 UTC (6 years ago) by saeedhp
Original Path: web-protege


Revision 23765 - Directory Listing
Modified Wed Sep 21 23:37:00 2011 UTC (6 years, 1 month ago) by nyulas
Original Path: web-protege
Added combo box selections for setting the language of ICTM titles and definitions, and updated combo box configurations for editorial status and WM causal properties to work with the recent changes done on the ComboBoxWidget.

Revision 23764 - Directory Listing
Modified Wed Sep 21 23:36:22 2011 UTC (6 years, 1 month ago) by nyulas
Original Path: web-protege
Updated combo box configurations for editorial status and causal properties to work with the recent changes done on the ComboBoxWidget.

Revision 23763 - Directory Listing
Modified Wed Sep 21 22:20:27 2011 UTC (6 years, 1 month ago) by nyulas
Original Path: web-protege
Added support for:
- combo boxes with user specified labels (i.e. allowed values can be specified by a map of label-value pairs; but we still support the simple list of allowed values);
- combo boxes used as a selection mechanism for InstanceGrid cells.

Extracted some off the UI constants in the UIConstants class, but we still need to refactor the whole code to use these constants everywhere.

Revision 23762 - Directory Listing
Modified Tue Sep 20 07:34:56 2011 UTC (6 years, 1 month ago) by nyulas
Original Path: web-protege
Changed ICTM project configuration to show "Is Grouping?" property at the linearization specifications and alternative label (aka "Transliteration") at the title terms.

Revision 23747 - Directory Listing
Modified Fri Sep 16 17:36:33 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23746 - Directory Listing
Modified Fri Sep 16 17:33:07 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23745 - Directory Listing
Modified Fri Sep 16 17:32:50 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23744 - Directory Listing
Modified Fri Sep 16 17:32:39 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23743 - Directory Listing
Modified Fri Sep 16 17:32:29 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23742 - Directory Listing
Modified Fri Sep 16 17:31:47 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23741 - Directory Listing
Modified Fri Sep 16 17:31:34 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23730 - Directory Listing
Modified Mon Sep 12 19:04:37 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23728 - Directory Listing
Modified Mon Sep 12 18:00:16 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23726 - Directory Listing
Modified Mon Sep 12 17:29:03 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23725 - Directory Listing
Modified Mon Sep 12 17:06:03 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23724 - Directory Listing
Modified Mon Sep 12 16:54:29 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23723 - Directory Listing
Modified Sat Sep 10 02:21:13 2011 UTC (6 years, 1 month ago) by saeedhp
Original Path: web-protege


Revision 23649 - Directory Listing
Modified Tue Aug 23 18:06:04 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Adapted the height of the Parents widget to look good in IE and Chrome.

Revision 23648 - Directory Listing
Modified Tue Aug 23 17:46:50 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Changed write access groups for TAG assignments.
Increased slightly the size of parents widget to align with all the other widgets and tabs, and to better fit content.

Revision 23634 - Directory Listing
Modified Sat Aug 20 00:58:27 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
fix for restriction editor to work also with browser texts with spaces
- minor fix: send the browser text with quotes (they were removed before)

Revision 23611 - Directory Listing
Modified Fri Aug 12 18:35:25 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
adding try catch in dispose - should never fail

Revision 23539 - Directory Listing
Modified Fri Jul 29 16:25:06 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Fixed typos and reformulated message for the TAG responsibilities message.

Revision 23519 - Directory Listing
Modified Fri Jul 29 00:15:23 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Removed BRO (virtual ont. ID 2000) from the BioPortal reference widget configurations.

Revision 23497 - Directory Listing
Modified Thu Jul 28 09:37:47 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Updated tooltip for Display Status.

Revision 23496 - Directory Listing
Modified Thu Jul 28 09:16:56 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Removed extraneous "Add existing value" link from ICTM configuration.

Revision 23495 - Directory Listing
Modified Thu Jul 28 08:47:29 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Changed tooltip for primary and secondary TAGs

Revision 23494 - Directory Listing
Modified Thu Jul 28 06:49:58 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
shortend the text

Revision 23493 - Directory Listing
Modified Thu Jul 28 06:43:57 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
updated stats for July 28.2011

Revision 23492 - Directory Listing
Modified Thu Jul 28 06:43:09 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
update for July 28, 2011

Revision 23491 - Directory Listing
Modified Thu Jul 28 05:12:59 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Swapped "Display Status" with "TAG Responsabilities" and made "TAG Responsabilities" bigger.

Revision 23490 - Directory Listing
Modified Thu Jul 28 05:07:34 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added support for the write access group
changed the write check (from UIUtil.confirmOperationAllowed to isWriteOperationAllowed)

Revision 23489 - Directory Listing
Modified Thu Jul 28 05:07:04 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added support for the write access group
changed the write check (from UIUtil.confirmOperationAllowed to isWriteOperationAllowed)

Revision 23488 - Directory Listing
Modified Thu Jul 28 05:04:39 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Added support for CSS color schemes for the tab headings in the PropertyFieldPortlet

Revision 23487 - Directory Listing
Modified Thu Jul 28 05:04:10 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
new version of icd.jar

Revision 23486 - Directory Listing
Modified Thu Jul 28 05:04:07 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Changed icon for replace value/term operations and changed layout of add, fins and replace value/term CONT.

Revision 23485 - Directory Listing
Modified Thu Jul 28 05:01:08 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added style for gwt textfields

Revision 23484 - Directory Listing
Modified Thu Jul 28 04:56:11 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
important fix for fillInGroups

Revision 23483 - Directory Listing
Modified Thu Jul 28 04:55:48 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added generic methods to deal with the write access group

Revision 23482 - Directory Listing
Modified Thu Jul 28 02:41:01 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added write permission for the display status si secondary tags widgets, only WHO group can edit them

Revision 23481 - Directory Listing
Modified Thu Jul 28 01:46:56 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
removed Commented Out Code

Revision 23480 - Directory Listing
Modified Thu Jul 28 01:40:38 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData
refactored several methods


Revision 23479 - Directory Listing
Modified Thu Jul 28 01:40:21 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
moved method to superclass
changed registerUser

Revision 23478 - Directory Listing
Modified Thu Jul 28 01:39:27 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
fixed name of the class
added utils for the user data

Revision 23477 - Directory Listing
Modified Thu Jul 28 01:39:08 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData
refactored several methods


Revision 23476 - Directory Listing
Modified Thu Jul 28 01:38:47 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData
refactored several methods
fixed bug: email was not added to the user when creating a new user


Revision 23475 - Directory Listing
Modified Thu Jul 28 01:38:00 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
moved the getUserAssociatedWithOpenId method here from the subclasses

Revision 23474 - Directory Listing
Modified Thu Jul 28 01:37:26 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added util

Revision 23473 - Directory Listing
Modified Thu Jul 28 01:37:05 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added constant for write access group

Revision 23472 - Directory Listing
Modified Thu Jul 28 01:36:48 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added generic method to deal with the write access group, which can be now a configuration on a property widget

Revision 23471 - Directory Listing
Modified Thu Jul 28 01:36:06 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData
refactored several methods


Revision 23470 - Directory Listing
Modified Thu Jul 28 01:35:50 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData
refactored several methods


Revision 23469 - Directory Listing
Modified Thu Jul 28 01:35:27 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
just a comment

Revision 23468 - Directory Listing
Modified Thu Jul 28 01:35:15 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
minor formatting

Revision 23467 - Directory Listing
Modified Thu Jul 28 01:34:58 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
a writeAccessGroup property can be set for a portlet configuration for future use

Revision 23466 - Directory Listing
Modified Thu Jul 28 01:34:23 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
the UserData is enough

Revision 23465 - Directory Listing
Modified Thu Jul 28 01:34:11 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added email, groups and a map of properties
removed password

Revision 23464 - Directory Listing
Modified Thu Jul 28 01:33:31 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData


Revision 23463 - Directory Listing
Modified Thu Jul 28 01:33:24 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change services argument for the user from string to UserData


Revision 23462 - Directory Listing
Modified Thu Jul 28 01:33:05 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
minor formatting

Revision 23461 - Directory Listing
Modified Thu Jul 28 01:32:48 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change admin service argument for the user from string to UserData
commented out getUserName - not clear that it is needed

Revision 23460 - Directory Listing
Modified Thu Jul 28 01:32:12 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added a UserData in the Session, rather than just the user name
added a sessionProperties map to hold useful stuff

Revision 23459 - Directory Listing
Modified Thu Jul 28 01:31:30 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
just a comment

Revision 23458 - Directory Listing
Modified Thu Jul 28 01:31:16 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change admin service argument for the user from string to UserData

Revision 23457 - Directory Listing
Modified Thu Jul 28 01:30:46 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
change admin service argument for the user from string to UserData

Revision 23438 - Directory Listing
Modified Wed Jul 27 23:28:20 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Changed icon for replace value/term operations and changed layout of add, fins and replace value/term

Revision 23434 - Directory Listing
Modified Wed Jul 27 19:42:23 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Configured add/replace actions on instance grid widgets correctly + deleted some trailing spaces

Revision 23433 - Directory Listing
Modified Wed Jul 27 18:55:17 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
minor refactor of getSubclassesRemoteCall

Revision 23432 - Directory Listing
Modified Wed Jul 27 18:54:41 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
made the remote getSubclasses remote call more extensible

Revision 23431 - Directory Listing
Modified Wed Jul 27 08:02:44 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added index stuff

Revision 23430 - Directory Listing
Modified Wed Jul 27 07:52:06 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Added "Is grouping?" column to ICD Linearization Grid
Added configuration not to show "Add existing value" links on instance grids that do not import external values but rather refer to "local" (i.e. internal) instances, such as definitions, etc.

Revision 23427 - Directory Listing
Modified Wed Jul 27 07:16:30 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Removed @Override to make it Java 1.5 compliant. 

Revision 23426 - Directory Listing
Modified Wed Jul 27 07:07:09 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Major commit including different changes:
- added two new widgets (ICDIndexWidget and ICDInclusionWidget);
- simplified the InstanceGridWidget.setExtraColumnValues() method to take the values in a single record (i.e. Object in a row) instead of all the values in the whole grid as the first argument;
- added support for check boxes within InstanceGridWidget
- made sure that ICDLinearizationWidget will not have any "add new value"-like button, irrespective of configuration (we have overridden the method createAddExistingHyperlink to return null);
- added general support for two-level configurations (widget-level config. + project-level config.) for any widget, used for now in InstanceGridWidget


Revision 23425 - Directory Listing
Modified Wed Jul 27 06:48:18 2011 UTC (6 years, 2 months ago) by nyulas
Original Path: web-protege
Added services for ICD index, inclusion and exclusuion widgets

Revision 23424 - Directory Listing
Modified Wed Jul 27 06:11:03 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
made it more configurable

Revision 23423 - Directory Listing
Modified Wed Jul 27 05:22:18 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
new version of icd.jar

Revision 23422 - Directory Listing
Modified Wed Jul 27 05:15:42 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
styles for the icd tree to show the display status

Revision 23421 - Directory Listing
Modified Wed Jul 27 05:15:01 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
new images for the display status

Revision 23420 - Directory Listing
Modified Wed Jul 27 05:11:39 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
minor

Revision 23419 - Directory Listing
Modified Wed Jul 27 05:11:26 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added getSubclasses to show the display status

Revision 23418 - Directory Listing
Modified Wed Jul 27 05:10:54 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
minor, added argument to setTreeIcon

Revision 23417 - Directory Listing
Modified Wed Jul 27 05:10:27 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
removed a comment

Revision 23416 - Directory Listing
Modified Wed Jul 27 05:10:08 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
showing the status as the node icon (blue, yellow, red)

Revision 23415 - Directory Listing
Modified Wed Jul 27 05:09:39 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
display status for icd tree

Revision 23414 - Directory Listing
Modified Wed Jul 27 05:09:09 2011 UTC (6 years, 2 months ago) by tudorache
Original Path: web-protege
added getSubclasses to add the status

Revision 23400 - Directory Listing
Modified Tue Jul 26 20:39:11 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
Fixed the issue with the remaining extra icon placeholder space, when a portlet becomes non-controlling.

Revision 23398 - Directory Listing
Modified Tue Jul 26 08:43:21 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
Changed Display Status from "Green" to "Blue"

Revision 23397 - Directory Listing
Modified Tue Jul 26 08:38:50 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
removed bogus code from getWatchedEntities

Revision 23396 - Directory Listing
Modified Tue Jul 26 07:52:28 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added also the notes in the watched entities

Revision 23395 - Directory Listing
Modified Tue Jul 26 07:36:10 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
enabled getWatchedBranches - which is very slow for large ChAO. Needs to be integrated with the other caches (notification servlet, etc.)

Revision 23394 - Directory Listing
Modified Tue Jul 26 06:45:19 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
update to the updateNote method

Revision 23393 - Directory Listing
Modified Tue Jul 26 06:45:02 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
the current BP user is now a static var in BioPortalUsersCache

Revision 23392 - Directory Listing
Modified Tue Jul 26 06:44:46 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added the current BP user as a static field - there is always just one per wp instance

Revision 23391 - Directory Listing
Modified Tue Jul 26 06:44:18 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
the current BP user is now a static var in BioPortalUsersCache

Revision 23390 - Directory Listing
Modified Tue Jul 26 06:43:48 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
refactored some methods
disabled delete
added archive and archive thread
disabled archive thread (BP bug)
made the BP user static

Revision 23389 - Directory Listing
Modified Tue Jul 26 06:42:46 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added archived

Revision 23388 - Directory Listing
Modified Tue Jul 26 06:42:14 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
updateNote, made an argument Boolean from boolean (needed null value)

Revision 23387 - Directory Listing
Modified Tue Jul 26 06:41:09 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
made background transparent

Revision 23386 - Directory Listing
Modified Tue Jul 26 04:56:43 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
Fixed the display of the BP search bean record type, to correctly display the "Found in" column in the BioPortalSearchComponent

Revision 23380 - Directory Listing
Modified Mon Jul 25 19:17:44 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
removed the delete note

Revision 23379 - Directory Listing
Modified Mon Jul 25 17:31:57 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
the bp icon

Revision 23378 - Directory Listing
Modified Mon Jul 25 17:31:47 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added style for the GWT popup menu and the gwt-ext html editor

Revision 23377 - Directory Listing
Modified Mon Jul 25 17:31:10 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
implementation of new bp services

Revision 23376 - Directory Listing
Modified Mon Jul 25 17:27:53 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added generic methods for HTTP POST, PUT, DELETE (BP calls need them)

Revision 23375 - Directory Listing
Modified Mon Jul 25 17:27:18 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
minor formatting

Revision 23374 - Directory Listing
Modified Mon Jul 25 17:26:54 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
changed slightly some dialogs for the user
added method guessValueType

Revision 23373 - Directory Listing
Modified Mon Jul 25 17:26:07 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
interface and abstract class for a validatable tab used in the portlet config

Revision 23372 - Directory Listing
Modified Mon Jul 25 17:25:40 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added null check for the projectConfig properties

Revision 23371 - Directory Listing
Modified Mon Jul 25 17:25:10 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
reversed the order of add new value and add existing value

Revision 23370 - Directory Listing
Modified Mon Jul 25 17:24:45 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
- new implementation of the BioPortalProposals portlet that has support for viewing notes in BP, creating new notes, replying to existing ones, setting the status
- delete is also implemented, but disabled until BP fixes backend bug

Revision 23369 - Directory Listing
Modified Mon Jul 25 17:23:26 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added generic method for handling the portlet configuration in the ui (the configuration panel)

Revision 23368 - Directory Listing
Modified Mon Jul 25 17:22:51 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
updated the apikey for stage
minor beautifying of the formatting

Revision 23367 - Directory Listing
Modified Mon Jul 25 17:21:59 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
removed the "Open in desktop client" link cause it doesn't work

Revision 23366 - Directory Listing
Modified Mon Jul 25 17:21:36 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
removed unnecessary portlets and tabs, sorted the other ones

Revision 23365 - Directory Listing
Modified Mon Jul 25 17:20:38 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added many other service calls for the BP service

Revision 23364 - Directory Listing
Modified Mon Jul 25 17:20:29 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added many other service calls for the BP service

Revision 23363 - Directory Listing
Modified Mon Jul 25 17:20:04 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
added as comment line the default GWT theme

Revision 23334 - Directory Listing
Modified Thu Jul 21 00:34:59 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
minor refactor

Revision 23274 - Directory Listing
Modified Fri Jul 15 00:48:18 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
- start the ChAOCacheUpdater
- we don't remove it when closing a project ... it's a memory leak, needs to be fixed

Revision 23273 - Directory Listing
Modified Fri Jul 15 00:47:38 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
removed hack for updating the HasAnnotioncache

Revision 23272 - Directory Listing
Modified Fri Jul 15 00:46:50 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
guard against null pointer

Revision 23244 - Directory Listing
Modified Thu Jul 14 19:28:31 2011 UTC (6 years, 3 months ago) by tudorache
Original Path: web-protege
refactored bioportal util

Revision 23211 - Directory Listing
Modified Wed Jul 13 22:55:08 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
- Made ClassInstanceReferenceFieldWidget read also the global BP search properties
- committed an earlier change related  to BioPortal API key usage

Revision 23210 - Directory Listing
Modified Wed Jul 13 22:36:59 2011 UTC (6 years, 3 months ago) by nyulas
Original Path: web-protege
Clean-up: deleted some unnecessary configurations for the InstanceReferenceWidget

Revision 23007 - Directory Listing
Modified Thu Jun 23 19:13:02 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
not needed

Revision 23006 - Directory Listing
Modified Thu Jun 23 19:05:35 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Updated configuration files to support mandatory BioPortal API key.

Revision 22999 - Directory Listing
Modified Thu Jun 23 01:00:51 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Added support for mandatory BioPortal API key.

Revision 22937 - Directory Listing
Modified Sat Jun 18 00:55:45 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
minor refactor

Revision 22936 - Directory Listing
Modified Sat Jun 18 00:55:28 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
make sure that the MywebProtege tab has a scrollbar

Revision 22921 - Directory Listing
Modified Thu Jun 16 01:04:45 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
updated icd jar

Revision 22916 - Directory Listing
Modified Thu Jun 16 00:49:51 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
moved some util methods to ICD - they should be moved to protege core

Revision 22915 - Directory Listing
Modified Thu Jun 16 00:49:23 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added the method to compute the inherited tags

Revision 22914 - Directory Listing
Modified Thu Jun 16 00:49:03 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored commaSeparatedList -> prettyPrintList that takes also the separator as an argument

Revision 22913 - Directory Listing
Modified Thu Jun 16 00:48:31 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a util method
minor

Revision 22912 - Directory Listing
Modified Thu Jun 16 00:48:15 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
- refactored long and complicated methods into short and simple one
- makes it also easier to extend

Revision 22911 - Directory Listing
Modified Thu Jun 16 00:47:24 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
make sure that the change description gets entity data rather than strings

Revision 22910 - Directory Listing
Modified Thu Jun 16 00:46:51 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added case to create also the inherited tags grid

Revision 22909 - Directory Listing
Modified Thu Jun 16 00:46:23 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added the icd inherited tag grid as a constant

Revision 22908 - Directory Listing
Modified Thu Jun 16 00:46:00 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a util method
minor

Revision 22907 - Directory Listing
Modified Thu Jun 16 00:45:31 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a util method
minor

Revision 22906 - Directory Listing
Modified Thu Jun 16 00:45:22 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a util method
minor

Revision 22905 - Directory Listing
Modified Thu Jun 16 00:45:13 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a util method
minor

Revision 22904 - Directory Listing
Modified Thu Jun 16 00:44:55 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
the grid that shows the inherited tags

Revision 22903 - Directory Listing
Modified Thu Jun 16 00:44:38 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added a properites map so that we can attach any property value pair to an entity data

Revision 22902 - Directory Listing
Modified Thu Jun 16 00:43:32 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added getInheritedAndSecondaryTags


Revision 22901 - Directory Listing
Modified Thu Jun 16 00:39:23 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added tooltips and help to the editorial information widgets

Revision 22900 - Directory Listing
Modified Thu Jun 16 00:36:50 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
updated text

Revision 22882 - Directory Listing
Modified Fri Jun 10 20:59:43 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Moved the 4 methods that allow closure generation base on a property and retrieving all the values for a specific property on each instance in such a closure
   FROM   Collb-Protege/KBUtil   TO   WebProtege/KBUtil
so that we can use these methods in WebProtege even before the next Protege release.
Please note that these 4 methods still need to be moved in the Protege-core/ModelUtil

Revision 22879 - Directory Listing
Modified Fri Jun 10 00:15:44 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
in getProtegeObject treat also "Any" value type - default to string

Revision 22878 - Directory Listing
Modified Fri Jun 10 00:15:07 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
taking out the autoscroll, each widget should add it if necessary

Revision 22876 - Directory Listing
Modified Thu Jun 9 15:24:50 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added rulers for editorial info

Revision 22875 - Directory Listing
Modified Thu Jun 9 14:26:11 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
trying to use a better font..

Revision 22874 - Directory Listing
Modified Thu Jun 9 14:25:55 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
rulers and instructions for TAG responsabilities and display status

Revision 22873 - Directory Listing
Modified Thu Jun 9 13:49:50 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added Editorial Information - not ready yet

Revision 22872 - Directory Listing
Modified Thu Jun 9 13:49:10 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added style for action links in the instance grid widget

Revision 22871 - Directory Listing
Modified Thu Jun 9 13:48:23 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added argument to select individuals whether to show or not the class tree

Revision 22870 - Directory Listing
Modified Thu Jun 9 13:47:57 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
made it configurable to show the class tree or not

Revision 22869 - Directory Listing
Modified Thu Jun 9 13:47:36 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
removed unnecessary line

Revision 22868 - Directory Listing
Modified Thu Jun 9 13:47:21 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
constants for the instance grid widget refactored in this class

Revision 22867 - Directory Listing
Modified Thu Jun 9 13:46:57 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
rearranging the code to make it more understandable

Revision 22866 - Directory Listing
Modified Thu Jun 9 13:46:18 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
deprecated it - use InstanceComboBox instead

Revision 22864 - Directory Listing
Modified Wed Jun 8 19:23:08 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored all class tree portlet constants in their own class

Revision 22863 - Directory Listing
Modified Wed Jun 8 19:22:41 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added one argument to selection of individuals, minor

Revision 22862 - Directory Listing
Modified Wed Jun 8 00:39:03 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added method to get the paged individuals of a class, refactored the search method to use the pagination util, and deleted unused method

Revision 22861 - Directory Listing
Modified Wed Jun 8 00:38:21 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
refactored the pagination methods to use the pagination util

Revision 22860 - Directory Listing
Modified Wed Jun 8 00:38:03 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
dispatch event from server for individual added and removed

Revision 22859 - Directory Listing
Modified Wed Jun 8 00:37:40 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
util class for all pagination methods (there will be more and more of them)

Revision 22858 - Directory Listing
Modified Wed Jun 8 00:37:13 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
the instance combobox allows the selection of the individuals of a class, and it is paged

Revision 22857 - Directory Listing
Modified Wed Jun 8 00:36:33 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added methods to create the instance combobox

Revision 22856 - Directory Listing
Modified Wed Jun 8 00:36:11 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added the instance combobox and page size

Revision 22855 - Directory Listing
Modified Wed Jun 8 00:35:51 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
- made the value change listener extensible
- removed commented out code
- removed GWT logs

Revision 22854 - Directory Listing
Modified Wed Jun 8 00:34:56 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added a null check, i wonder how it worked before..

Revision 22853 - Directory Listing
Modified Wed Jun 8 00:34:34 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
a proxy that returns the individuals of a class paged

Revision 22852 - Directory Listing
Modified Wed Jun 8 00:34:15 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added method for getting the individuals of a class paged

Revision 22851 - Directory Listing
Modified Wed Jun 8 00:33:26 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added interface for individual added and individual removed

Revision 22850 - Directory Listing
Modified Wed Jun 8 00:33:04 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added: individual added and individual removed event

Revision 22849 - Directory Listing
Modified Wed Jun 8 00:32:47 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
dispatch also individual added and individual removed event

Revision 22848 - Directory Listing
Modified Mon Jun 6 23:05:19 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
committing a dangerous fix that might cause infinite loops if setEntity in the ClassTreePortlet will do fancier things in the future

Revision 22847 - Directory Listing
Modified Mon Jun 6 18:05:31 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Increase "Title" portlet for the "Value Sets" tab

Revision 22844 - Directory Listing
Modified Sat Jun 4 01:56:12 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Moved "Manage ICPS Hierarchy" tab right after "ICPS Content" tab to be the 3rd tab instead of the 6th

Revision 22843 - Directory Listing
Modified Sat Jun 4 01:48:56 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Added different colors for iCAT-PS tabs with special functionality

Revision 22838 - Directory Listing
Modified Sat Jun 4 00:54:36 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
moved to ICD project

Revision 22823 - Directory Listing
Modified Sat Jun 4 00:21:30 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
moved to the ICD project where they belong

Revision 22822 - Directory Listing
Modified Sat Jun 4 00:18:14 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
moved to the ICD project where they belong

Revision 22821 - Directory Listing
Modified Sat Jun 4 00:16:19 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
change tracking for ictm cm

Revision 22820 - Directory Listing
Modified Fri Jun 3 23:46:40 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
minor update

Revision 22819 - Directory Listing
Modified Fri Jun 3 22:27:18 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Added support for specially styled tabs (e.g. tabs with different colors)

Revision 22818 - Directory Listing
Modified Thu Jun 2 01:50:38 2011 UTC (6 years, 4 months ago) by nyulas
Original Path: web-protege
Fixed top class for value set for "Process Involved in Falls"

Revision 22817 - Directory Listing
Modified Thu Jun 2 00:09:15 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
updated icd.jar

Revision 22816 - Directory Listing
Modified Wed Jun 1 19:41:42 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
updated the youtube movie links to be embedded in the who youtube channel

Revision 22815 - Directory Listing
Modified Wed Jun 1 19:32:12 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
change the links to the training videos to point to youTube

Revision 22814 - Directory Listing
Modified Sat May 28 20:33:51 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
minor change in getSubproperties

Revision 22813 - Directory Listing
Modified Sat May 28 20:32:46 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
added utility to select individuals

Revision 22812 - Directory Listing
Modified Sat May 28 20:32:29 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
a panel that allows the selection of an instance: shows the classes tree, and the instances for each class. can be toggled to show only classes in domain or all classes

Revision 22811 - Directory Listing
Modified Sat May 28 20:31:51 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
supports now multiple selection

Revision 22810 - Directory Listing
Modified Sat May 28 20:31:33 2011 UTC (6 years, 4 months ago) by tudorache
Original Path: web-protege
handles now also adding of instance values
refactors

Revision 22788 - Directory Listing
Modified Fri May 20 02:21:29 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
minor rearrangement for create cls with property

Revision 22787 - Directory Listing
Modified Fri May 20 00:40:52 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed LabelingClassTreePortlet:
- increased size of "new class name" dialog window (applied change to ClassTreePortlet as well) 
- implemented a different class name validation than at ClassTreeportlet
- rewrote implementation of the createClsWithProperty method in a more general and simplified manner.

Revision 22780 - Directory Listing
Modified Wed May 18 02:01:46 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
updated to gwt 2.2.0

Revision 22779 - Directory Listing
Modified Wed May 18 01:16:55 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
updated to gwt 2.2.0

Revision 22778 - Directory Listing
Modified Wed May 18 01:13:37 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
taking out the new icon for the cm ref guide

Revision 22777 - Directory Listing
Modified Wed May 18 01:00:55 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
update the link to the release notes

Revision 22759 - Directory Listing
Modified Mon May 16 21:17:18 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
WebProtege beta release from 2011.05.13

Revision 22757 - Directory Listing
Modified Sat May 14 01:10:10 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
increasing height of restrcition portlet

Revision 22756 - Directory Listing
Modified Sat May 14 01:02:23 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed add superclass bug (which manifested itself when we tried to add superclasseses to a class that had itself as its superclass (local cycle)

Revision 22755 - Directory Listing
Modified Sat May 14 00:38:00 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
Implemented different check for cycles in OWL ontologies. 
Added quick fix: removed unnecessary check for success in OntologyServiceImpl.

Revision 22754 - Directory Listing
Modified Sat May 14 00:19:00 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
commented out unmask - we should get rid of this

Revision 22753 - Directory Listing
Modified Sat May 14 00:18:20 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
minor refactor

Revision 22752 - Directory Listing
Modified Fri May 13 23:40:33 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added argument checkForCycles to moveCls

Revision 22751 - Directory Listing
Modified Fri May 13 23:40:17 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added argument checkForCycles to moveCls: webprotege class tree does not check for cycles, icd does

Revision 22750 - Directory Listing
Modified Fri May 13 23:39:44 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added argument checkForCycles to moveCls

Revision 22749 - Directory Listing
Modified Fri May 13 23:14:50 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
taking out the ManageHierarchyTab from the list of available tabs (it can still be constructed)
- it must be made independent of ICD

Revision 22748 - Directory Listing
Modified Fri May 13 23:06:24 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
fix for resizing TopPanel

Revision 22747 - Directory Listing
Modified Fri May 13 23:05:44 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
fix for resizing the top panel

Revision 22746 - Directory Listing
Modified Fri May 13 22:47:18 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
save icon

Revision 22745 - Directory Listing
Modified Fri May 13 22:46:55 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
starting to work on the project configuration save - not working yet properly

Revision 22744 - Directory Listing
Modified Fri May 13 22:45:38 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
moving the save configuration outside of the menu

Revision 22743 - Directory Listing
Modified Fri May 13 22:45:16 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
implementing equals and hashcode

Revision 22741 - Directory Listing
Modified Fri May 13 18:42:43 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
fix for the sorting order of portlets in a tab

Revision 22740 - Directory Listing
Modified Fri May 13 17:59:35 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
make sure that save project configuration saves in the same format as the read

Revision 22739 - Directory Listing
Modified Fri May 13 17:59:09 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
sorting now the portlets based on the index in the tab

Revision 22738 - Directory Listing
Modified Fri May 13 17:58:43 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
removed boolean return value for save project layout

Revision 22737 - Directory Listing
Modified Fri May 13 17:58:10 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added a bogus boolean field, so that Boolean is serializable for the RPC.. somehow the compiler over-optimizes and it doesn't work otherwise.

Revision 22736 - Directory Listing
Modified Fri May 13 17:57:27 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added an index field to order the portlets i a column

Revision 22735 - Directory Listing
Modified Fri May 13 17:56:51 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
save project configuration does not return a boolean anymore

Revision 22730 - Directory Listing
Modified Thu May 12 22:24:10 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
removed unneeded class

Revision 22729 - Directory Listing
Modified Thu May 12 21:33:36 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
removed unneeded class

Revision 22728 - Directory Listing
Modified Thu May 12 21:02:19 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
changed the getProtegeObject - it tries to infer the property value type from the Protege property value type

Revision 22727 - Directory Listing
Modified Thu May 12 21:01:25 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
made the language also editable
refactored constants
fixes for editing the values

Revision 22726 - Directory Listing
Modified Thu May 12 21:00:47 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
removed the default value type - it is now handled on the server

Revision 22725 - Directory Listing
Modified Thu May 12 19:58:51 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
Added target="_blank" for the direct link to BioPortal in the BP search component's details view, and fixed the target=_blank spelling to proper HTML spelling target="_blank" everywhere.

Revision 22722 - Directory Listing
Modified Thu May 12 01:16:29 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
style for the controlling portlet

Revision 22721 - Directory Listing
Modified Thu May 12 01:15:59 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
image for noting the controlling portlet

Revision 22720 - Directory Listing
Modified Thu May 12 01:15:06 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added the possibility to change the controlling portlet

Revision 22718 - Directory Listing
Modified Wed May 11 01:29:18 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added setConfigurationValue method

Revision 22717 - Directory Listing
Modified Wed May 11 01:28:59 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
fixed it so that it works with the new property widget mechanism
the widget now responds to isReadOnly and isDisabled flags in the widget config

Revision 22716 - Directory Listing
Modified Wed May 11 01:28:13 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
moved isReadOnly and isDisabled flag in AbstractPropertyWidget
these flags are not cached anymore and read everytime from the widget config

Revision 22715 - Directory Listing
Modified Wed May 11 01:27:09 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added some javadoc

Revision 22714 - Directory Listing
Modified Wed May 11 01:26:57 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
added setDisabled and setReadOnly

Revision 22710 - Directory Listing
Modified Tue May 10 00:04:59 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
forgot the images from the stats html

Revision 22709 - Directory Listing
Modified Mon May 9 23:47:35 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
updating stats to May 09, 2011

Revision 22708 - Directory Listing
Modified Mon May 9 23:47:02 2011 UTC (6 years, 5 months ago) by tudorache
Original Path: web-protege
updating images for stats of May 09, 2011

Revision 22684 - Directory Listing
Modified Fri May 6 21:59:55 2011 UTC (6 years, 5 months ago) by nyulas
Original Path: web-protege
Added new tab for External Causes section to show ICD-10 references and changed multiple value restrictions for mechanism, object, place, activity and substance use.

Revision 22493 - Directory Listing
Modified Tue Apr 19 22:12:46 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Parents (i.e. superclasses) are clickable links, allowing easier navigation in poly-hierarchies. 

Revision 22418 - Directory Listing
Modified Wed Apr 13 04:13:09 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
updated to stats from April 12, 2011

Revision 22368 - Directory Listing
Modified Fri Apr 8 18:41:30 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
made the projects2cache synchronized hash map - might not be enough

Revision 22367 - Directory Listing
Modified Fri Apr 8 18:40:57 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
changed intialization of the WatchedCache for projects that don't have chao enabled

Revision 22298 - Directory Listing
Modified Fri Apr 1 22:09:33 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Added new functionality to show the internal ID of a class

Revision 22296 - Directory Listing
Modified Fri Apr 1 21:35:27 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
making the class selection field more extensible

Revision 22295 - Directory Listing
Modified Fri Apr 1 21:35:06 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
using for the parents tree the ICD class tree

Revision 22294 - Directory Listing
Modified Fri Apr 1 21:34:43 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
using for the parents tree the ICD class tree

Revision 22293 - Directory Listing
Modified Fri Apr 1 21:34:14 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
using for the parents tree the ICD class tree

Revision 22292 - Directory Listing
Modified Fri Apr 1 21:33:52 2011 UTC (6 years, 6 months ago) by tudorache
Original Path: web-protege
added constructor

Revision 22291 - Directory Listing
Modified Fri Apr 1 21:32:23 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Added new functionality to the ICDLinearizationWidget (and also to the more general InstanceGridWidget) to allow to remove "Boolean" and "Instance" typed instance property values using the context menu.
Also, the ICDLinearizationWidget  now shows the default linearization parent, if there is not already set by the user.

Revision 22233 - Directory Listing
Modified Wed Mar 30 21:14:53 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Changed the width of the "linearization name" column to accommodate the longest name (Spe. Ad.: Occ. Health) in a single row.

Revision 22220 - Directory Listing
Modified Wed Mar 30 06:26:41 2011 UTC (6 years, 6 months ago) by zeeshan
Original Path: web-protege
Send Invitation window with read or write option is rendering fine on my machine locally, if it is resolution issue then I had increased the width of the panel.

Revision 22195 - Directory Listing
Modified Tue Mar 29 02:17:26 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Added check for cycle creation also to the drag-and-drop operation in the ClassTreePortlet.
Added check and workaround solution for orphan cycles created through both the "manage hierarchy" -> "change parents" operation, or by drag-and-drop in the class tree.

Revision 22191 - Directory Listing
Modified Mon Mar 28 23:27:26 2011 UTC (6 years, 6 months ago) by nyulas
Original Path: web-protege
Fixed a bug in Tania's fix for correct class creation using parents' metadata.

Revision 22169 - Directory Listing
Modified Thu Mar 24 19:11:43 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
some more checks for getpath to root
remomved unnecessary call from getsubclasses

Revision 22168 - Directory Listing
Modified Thu Mar 24 19:10:17 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
log message

Revision 22167 - Directory Listing
Modified Thu Mar 24 17:43:42 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
added a doLayout after filling the grid - not sure it is needed

Revision 22165 - Directory Listing
Modified Thu Mar 24 16:48:53 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
adding the BioPortal Proposals servlet - not ready yet

Revision 22164 - Directory Listing
Modified Thu Mar 24 16:48:09 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
the pencil icon for edit actions

Revision 22163 - Directory Listing
Modified Thu Mar 24 16:47:51 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
added styles for the restriction portlet

Revision 22162 - Directory Listing
Modified Thu Mar 24 16:47:15 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
the server side for the BioPortal proposals - not ready yet (obviously)

Revision 22161 - Directory Listing
Modified Thu Mar 24 16:46:27 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
don't send events for anonymous classes

Revision 22160 - Directory Listing
Modified Thu Mar 24 16:46:10 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
give xstream a filereader rather than an xml string with the configuration (which was useful to reveal almost out of memory state)

Revision 22159 - Directory Listing
Modified Thu Mar 24 16:44:58 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
- added methods for restriction editing
- fixed createCls!! (don't even mention it!)
- removed some bogus line in create annotation property that would add a bogus rdfs:label (guess who)


Revision 22158 - Directory Listing
Modified Thu Mar 24 16:43:21 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
The BioPortal proposals portlet - not ready yet

Revision 22157 - Directory Listing
Modified Thu Mar 24 16:42:47 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
New restriction portlet that support editing restriction. It uses the ConditionsTableModel in P3 OWL and restrictions are layout out and edited using this class.

Revision 22156 - Directory Listing
Modified Thu Mar 24 16:42:00 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
this is the old restriction portlet that only shows restrictions but does not browse them

Revision 22155 - Directory Listing
Modified Thu Mar 24 16:41:35 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
a generic class condition editor

Revision 22154 - Directory Listing
Modified Thu Mar 24 16:41:16 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
- when creating new classes - check the name first
- fix for class showing up in two places in the tree after class create

Revision 22153 - Directory Listing
Modified Thu Mar 24 16:40:26 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
- renamed the old RestrictionPortlet to HtmlRestrictionPortlet
- added the BioPortal portlet, although it is not ready yet

Revision 22152 - Directory Listing
Modified Thu Mar 24 16:39:44 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
not yet ready - the initial import of the BioPortal proposals

Revision 22151 - Directory Listing
Modified Thu Mar 24 16:38:57 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
classes needed for editing restrictions in the new RestrictionPortlet

Revision 22150 - Directory Listing
Modified Thu Mar 24 16:38:18 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
added methods to edit restrictions

Revision 22149 - Directory Listing
Modified Thu Mar 24 16:37:57 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
just rearranging the methods list to make the code auto-completion more convenient

Revision 22148 - Directory Listing
Modified Thu Mar 24 16:37:12 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
added a toString method to make them easier to debug

Revision 22146 - Directory Listing
Modified Thu Mar 24 10:00:53 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Bug fix for ValueType not being always correctly passed over.

Revision 22145 - Directory Listing
Modified Thu Mar 24 04:41:19 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Replaced Character.isJavaIdentifierPart with a custom made method to check for valid characters that for Protege identifier, because GWT does not support Character.isJavaIdentifierPart

Revision 22143 - Directory Listing
Modified Thu Mar 24 04:13:31 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
Added method to remove HTML text.

Revision 22142 - Directory Listing
Modified Thu Mar 24 04:06:28 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Added two methods to find the beginning and the end of an identifier given starting from an arbitrary position in the text.

Revision 22042 - Directory Listing
Modified Fri Mar 18 05:33:52 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
added target to compile authenticate module(removed during merging)

Revision 22025 - Directory Listing
Modified Thu Mar 17 20:25:49 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Added check for loops generated during hierarchy change operation. [belongs to rev. 22013]


Revision 22022 - Directory Listing
Modified Thu Mar 17 12:50:28 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
added image for select date button in changes portlet.

Revision 22021 - Directory Listing
Modified Thu Mar 17 12:49:45 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added changes functionality implementation.

Revision 22020 - Directory Listing
Modified Thu Mar 17 12:49:01 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
added some formatting

Revision 22019 - Directory Listing
Modified Thu Mar 17 12:43:22 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added filter util to create filter widget. and added changesFilterData to store filter values.

Revision 22018 - Directory Listing
Modified Thu Mar 17 12:42:12 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added functionality to update store based on filter parameters.

Revision 22017 - Directory Listing
Modified Thu Mar 17 12:41:14 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
added filter to toptoolbar in changes portlet

Revision 22016 - Directory Listing
Modified Thu Mar 17 12:35:29 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Updated reader/writer List GUI, now names height are same for all and removed the message appearing after saving changes.
And share access window closes after click of 'Ok' button.


Revision 22015 - Directory Listing
Modified Thu Mar 17 12:21:50 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added changes portlet filter functionality rpc method declaration.

Revision 22014 - Directory Listing
Modified Thu Mar 17 12:18:04 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
updated facebook inherit call

Revision 22013 - Directory Listing
Modified Thu Mar 17 07:10:12 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Added check for loops generated during hierarchy change operation.

Revision 22010 - Directory Listing
Modified Wed Mar 16 23:22:32 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Fixed ClassTreePortlet not to use classes from java.text package (like MessageFormat) and the URLEncoder, because they are not supported by GWT. 
Instead, we use simple String replacement and the com.google.gwt.http.client.URL class.

Revision 21902 - Directory Listing
Modified Fri Mar 11 22:44:08 2011 UTC (6 years, 7 months ago) by nyulas
Original Path: web-protege
Added context menu to class tree to provide users a direct link to the class

Revision 21890 - Directory Listing
Modified Fri Mar 11 06:47:17 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Updated web.xml

Revision 21889 - Directory Listing
Modified Fri Mar 11 06:46:09 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added function for invitation , after removing from webprotege

Revision 21888 - Directory Listing
Modified Fri Mar 11 06:44:45 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Replaced UserData object usage with AccessPolicyUserData object

Revision 21887 - Directory Listing
Modified Fri Mar 11 06:43:34 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Restored LoginUtil after merging.

Revision 21886 - Directory Listing
Modified Fri Mar 11 06:12:21 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Restored TopPanel after merging.

Revision 21885 - Directory Listing
Modified Fri Mar 11 06:08:07 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
removed varable isPartOfReader and isPartOfWriter

Revision 21884 - Directory Listing
Modified Fri Mar 11 06:06:48 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
added function to retrieve value of facebook.app.api.key from property file.

Revision 21883 - Directory Listing
Modified Fri Mar 11 06:05:55 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added AccessPolicyUserData transfer object.

Revision 21882 - Directory Listing
Modified Fri Mar 11 06:04:58 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Replaced UserData object usage with AccessPolicyUserData object

Revision 21881 - Directory Listing
Modified Fri Mar 11 06:03:46 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Replaced UserData object usage with AccessPolicyUserData object

Revision 21880 - Directory Listing
Modified Fri Mar 11 06:01:39 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Removed share access listeners.

Revision 21879 - Directory Listing
Modified Fri Mar 11 05:59:52 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Refactored : moved invitation code to its owl class.

Revision 21878 - Directory Listing
Modified Fri Mar 11 05:58:11 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added facebook code(missing after merging)

Revision 21867 - Directory Listing
Modified Thu Mar 10 14:14:22 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Formatted the file.

Revision 21866 - Directory Listing
Modified Thu Mar 10 14:12:26 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added tab change listener for share access policy. (removed during merging with who)

Revision 21865 - Directory Listing
Modified Thu Mar 10 14:10:47 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Added functionality to get facebook api key

Revision 21864 - Directory Listing
Modified Thu Mar 10 14:09:22 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Fixed facebook login after merge with who branch

Revision 21863 - Directory Listing
Modified Thu Mar 10 14:00:51 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Moved process invitation from WebProtege.java

Revision 21862 - Directory Listing
Modified Thu Mar 10 13:59:11 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
updated function canManageProject.

Revision 21849 - Directory Listing
Modified Wed Mar 9 06:59:46 2011 UTC (6 years, 7 months ago) by zeeshan
Original Path: web-protege
Deleted chat classes (added for testing)

Revision 21846 - Directory Listing
Modified Wed Mar 9 02:41:25 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21845 - Directory Listing
Modified Wed Mar 9 02:40:57 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21844 - Directory Listing
Modified Wed Mar 9 02:40:34 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21843 - Directory Listing
Modified Wed Mar 9 02:39:55 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21842 - Directory Listing
Modified Wed Mar 9 02:38:13 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21841 - Directory Listing
Modified Wed Mar 9 02:37:23 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
syncronized with WHO branch rev 21837

Revision 21838 - Directory Listing
Modified Tue Mar 8 19:57:04 2011 UTC (6 years, 7 months ago) by tudorache
Original Path: web-protege
removed @override

Revision 21743 - Directory Listing
Modified Thu Feb 24 12:02:09 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Updated web.xml added mapping for chat service 

Revision 21742 - Directory Listing
Modified Thu Feb 24 11:52:49 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Added Chat Service template

Revision 21741 - Directory Listing
Modified Thu Feb 24 09:26:12 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
updated web.xml for access policy servlet

Revision 21733 - Directory Listing
Modified Tue Feb 22 23:36:16 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
adding the images to the stats

Revision 21732 - Directory Listing
Modified Tue Feb 22 23:32:43 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
Updating statistics for Feb 22, 2011

Revision 21663 - Directory Listing
Modified Mon Feb 14 23:32:29 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added some more spacing

Revision 21662 - Directory Listing
Modified Mon Feb 14 23:22:41 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added new movies

Revision 21661 - Directory Listing
Modified Mon Feb 14 23:21:36 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
new icons

Revision 21648 - Directory Listing
Modified Mon Feb 14 07:23:25 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Updated Toppanel resizing feature. Now Toppanel(with links) resizes according to the browser width(so that's its visible).

Revision 21625 - Directory Listing
Modified Fri Feb 11 20:30:43 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
removed some code that could cause null pointer ex. the cause is still not addressed

Revision 21623 - Directory Listing
Modified Thu Feb 10 12:06:09 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Updated invitation functionality - added invitation expiration feature.

Revision 21622 - Directory Listing
Modified Thu Feb 10 11:49:34 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Added property for invitation expiration days count 'account.invitation.expiration.period.in.days'

Revision 21598 - Directory Listing
Modified Tue Feb 8 11:34:44 2011 UTC (6 years, 8 months ago) by zeeshan
Original Path: web-protege
Added functionality for sending external user invitation for Webprotege project as Reader/Writer.

Revision 21546 - Directory Listing
Modified Wed Feb 2 03:20:20 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Added 20/40 px to the height of the optional Cold or Heat/Fuku SHo properties

Revision 21545 - Directory Listing
Modified Wed Feb 2 03:00:19 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
- Replaced the representation of Meridian System from checkboxes to BioPortal reference
- Added Functioning Properties tab
- Removed Herbs and Formula from Treatment tab
- Fixed several of the ruler texts
- Changed Histopathology to Morphology, Fukusho to "Fuku Sho"
- Set "TM" as default search string for all the BioPortal reference widgets for the TM specific properties

Revision 21544 - Directory Listing
Modified Wed Feb 2 02:39:25 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
fixed the last line in the email

Revision 21543 - Directory Listing
Modified Wed Feb 2 02:25:55 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
fixed the application url..

Revision 21542 - Directory Listing
Modified Wed Feb 2 02:17:23 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
set the text and content encoding to utf-8

Revision 21541 - Directory Listing
Modified Wed Feb 2 01:50:52 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
send the watch data for getEntity

Revision 21540 - Directory Listing
Modified Wed Feb 2 01:45:27 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
the meridians value set

Revision 21539 - Directory Listing
Modified Wed Feb 2 01:45:03 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
the meridians value set

Revision 21537 - Directory Listing
Modified Wed Feb 2 01:35:03 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
-	Added icd:MultiDescriptionTerm as a superclass of both ictm:Type and icd:Type
-	Added language specific titles and definitions for all icd:Type and ictm:Type instances
-	Specified all the missing language value for all TitleTerm, SynonymTerm and DefinitionTerm instances
-	Made ictm:OtherFactorsTMTerm a subclass of icd:CausalPropertyTerm instead of being direct subclass of icd:BioportalReferenceTerm
-	Added ictm:MeridianSystemTMTerm as a subclass of icd:ClinicalDescriptionTerm (and updated the rdfs:label and comment of the icd:ClinicalDescriptionTerm)


Revision 21529 - Directory Listing
Modified Tue Feb 1 11:55:56 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Fixed invalid reference to the ruler HTML for zangfu_systems
Created 2 separate version: (the official) one excludes Diagnostic Rule for Patterns of Essence Components, the other one (for user "Previewer") includes it.

Revision 21528 - Directory Listing
Modified Tue Feb 1 11:10:18 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Shortened the labels of meridians.
Changed path to external HTML files from "../html/XYZ.html" to "html/XYZ.html"

Revision 21527 - Directory Listing
Modified Tue Feb 1 10:12:23 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Fixed the references to the TM value sets in BioPortal:
    Constitution Risk factor: 1570
    Other factors: 1571
    Signs and symptoms (TM): 1572

Revision 21526 - Directory Listing
Modified Tue Feb 1 09:17:25 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Full configuration as per ICTM Value Set Excel sheet V5. 
(Contains long meridian names - with synonyms - and Patterns of essential substances

Revision 21525 - Directory Listing
Modified Tue Feb 1 09:10:29 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
-	Created 2 new instances of ExternalContractionTMTerm class:
        WarmToxinAndPestilentialQiTMExopathicFactor
        InfectionOfPestilentialFactorsTMExopathicFactor
- Removed ictm:Type as superclass of icd:Type and changed definition of ictm:Type to “icd:Type or {DiseaseTMType, PatternTMType}”
- Created ictm:hasType property as a sub-property of who-fic:hasType. Ictm:hasType is functional and its range is ictm:Type.


Revision 21524 - Directory Listing
Modified Tue Feb 1 08:31:14 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Created who-fic:hasType as a super-property of icd:hasType. who-fic:hasType is non-fuctional and its range is who-fic:Type.

Revision 21523 - Directory Listing
Modified Tue Feb 1 00:46:58 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
not sure what the changes are, but I still commit it just in case.. now I wish I had an OWL diff button in SVN...

Revision 21522 - Directory Listing
Modified Tue Feb 1 00:43:38 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
sources to import in iCAT-TM and BP from Molly. Version 5

Revision 21521 - Directory Listing
Modified Tue Feb 1 00:42:24 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
Tm value sets imported using the importer from the ICD project

Revision 21520 - Directory Listing
Modified Tue Feb 1 00:41:37 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
moved to a different folder

Revision 21512 - Directory Listing
Modified Sat Jan 29 00:34:53 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
just ui config changes

Revision 21511 - Directory Listing
Modified Sat Jan 29 00:34:19 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
removed empty annotation file

Revision 21510 - Directory Listing
Modified Sat Jan 29 00:33:53 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added annotation_ictm_content_model to track the changes to the cm itself

Revision 21509 - Directory Listing
Modified Sat Jan 29 00:31:58 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added annotation_ictm_umbrella

Revision 21508 - Directory Listing
Modified Sat Jan 29 00:28:32 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
initial import

Revision 21507 - Directory Listing
Modified Sat Jan 29 00:28:23 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added language en to ICTMCategories title

Revision 21472 - Directory Listing
Modified Thu Jan 27 04:30:17 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
fixing the height of the images

Revision 21470 - Directory Listing
Modified Thu Jan 27 01:58:02 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added stats graph

Revision 21469 - Directory Listing
Modified Thu Jan 27 01:57:45 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added graphs

Revision 21465 - Directory Listing
Modified Thu Jan 27 00:05:50 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
- Fixed up the values for the icd:sortingLabel and the icd:icdTitle properties for the example ICTM category instances
- Renamed property:
    - sixStagesOfDiseaseTransformation to sixStagesOfDiseaseTransformationTM
    - zangFuSystem to zangfuSystem
- Replaced labels/titles for:
    - UpperRegionTM, MiddleRegionTM, LowerRegionTM
    - All instances of MeridianSystemTMTerm


Revision 21464 - Directory Listing
Modified Thu Jan 27 00:03:14 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
- Changed and added rdfs:comment to the LinearizationView instances: Morbidity, Mortality & PrimaryCare and Research.
- Changed the value of sortingCode property of all LinearizationView instances to use 2 digits in order to allow more than 10 linearizations.


Revision 21463 - Directory Listing
Modified Wed Jan 26 23:56:11 2011 UTC (6 years, 8 months ago) by nyulas
Original Path: web-protege
Configured tabs for the first 5 type of properties (up to Body System Description). Labels of TM Meridian Systems need to be updated.

Revision 21462 - Directory Listing
Modified Wed Jan 26 22:57:54 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
made the Watch branch the default

Revision 21461 - Directory Listing
Modified Wed Jan 26 22:54:10 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
don't send email if no content

Revision 21460 - Directory Listing
Modified Wed Jan 26 22:52:17 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
formatting

Revision 21459 - Directory Listing
Modified Wed Jan 26 22:51:57 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
fix for the subject of class creation

Revision 21458 - Directory Listing
Modified Wed Jan 26 22:21:50 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added the magnifier icon for search

Revision 21457 - Directory Listing
Modified Wed Jan 26 19:42:41 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
changed the sendNotification: own changes are not sent now: need a metaproject property that can be set for the user to control this setting

Revision 21456 - Directory Listing
Modified Wed Jan 26 19:41:40 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
refactored name

Revision 21455 - Directory Listing
Modified Wed Jan 26 19:41:30 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added a method, made constructor private

Revision 21452 - Directory Listing
Modified Wed Jan 26 17:22:14 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
Refactored the maps in the Watched cache to use strings rather than objects. (as it was before). The reason is that it is easier to go between ontologies this way. If not, we would have used constantly the getOntologyComponent call, which is very expensive. 

Revision 21447 - Directory Listing
Modified Wed Jan 26 06:34:19 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
add spacer in the toolbar rather than fill

Revision 21446 - Directory Listing
Modified Wed Jan 26 06:33:35 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
start auto search after 3 chars

Revision 21445 - Directory Listing
Modified Wed Jan 26 06:33:00 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
change the show in window button icon

Revision 21440 - Directory Listing
Modified Wed Jan 26 01:56:52 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
extracted the inner class to its own file

Revision 21439 - Directory Listing
Modified Wed Jan 26 01:56:34 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
extracted from the notification scheduler servlet

Revision 21431 - Directory Listing
Modified Tue Jan 25 19:32:54 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
new icon

Revision 21430 - Directory Listing
Modified Tue Jan 25 19:32:43 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added a new icon to the icd ref guide

Revision 21428 - Directory Listing
Modified Tue Jan 25 19:07:45 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
made it smaller, added orange border

Revision 21427 - Directory Listing
Modified Tue Jan 25 18:58:05 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
moved the right place

Revision 21426 - Directory Listing
Modified Tue Jan 25 18:51:15 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
minor corrections

Revision 21425 - Directory Listing
Modified Tue Jan 25 18:48:43 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
moved it to the right place

Revision 21424 - Directory Listing
Modified Tue Jan 25 18:47:08 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added the icd ref guide image

Revision 21423 - Directory Listing
Modified Tue Jan 25 18:46:43 2011 UTC (6 years, 8 months ago) by tudorache
Original Path: web-protege
added the icd ref guide, took out notifications

Revision 21418 - Directory Listing
Modified Tue Jan 25 06:56:54 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
stats in 2011.01.24

Revision 21395 - Directory Listing
Modified Mon Jan 24 20:34:00 2011 UTC (6 years, 9 months ago) by nyulas
Original Path: web-protege
Separated who-fic:Type, icd:Type and ictm:Type and built proper hierarchy and definition of those classes

Revision 21394 - Directory Listing
Modified Mon Jan 24 20:16:09 2011 UTC (6 years, 9 months ago) by nyulas
Original Path: web-protege
1. Added and defined (by adding title, synonyms and definition) further value set instances
2.	Renamed 
   - HeatTMExopathicFactor to FireTMExopathicFactor
   - TerrorTMEndopathicFactor to FrightTMEndopathicFactor
   - MelancholyTMEndopathicFactor to ThoughtfulnessTMEndopathicFactor
   - GriefTMEndopathicFactor to SorrowTMEndopathicFactor
   - TaiYangStage to GreaterYangDiseaseStage
   - YangMingStage to YangBrightnessDiseaseStage
   - IrritableHeatSensationInHandAndFootTMPattern to VexingHeatInExtremitiesTMPattern
   - SevereColdnessOfExtremitiesTMPattern  to ReversalColdOfExtremitiesTMPattern
3.	Made OtherFactorsTMTerm subclass of icd:BioportalReferenceTerm


Revision 21392 - Directory Listing
Modified Mon Jan 24 19:03:30 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added a folder for additional resources

Revision 21344 - Directory Listing
Modified Sat Jan 22 00:50:28 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
changed Histopathology -> Morphology as per Bedirhan's email from 2011/01/11 and CM from Nov. 2010

Revision 21343 - Directory Listing
Modified Sat Jan 22 00:43:23 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
resized the icons

Revision 21342 - Directory Listing
Modified Sat Jan 22 00:42:54 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
minor

Revision 21339 - Directory Listing
Modified Sat Jan 22 00:13:27 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
for the subclass added event, add also the types of the subclass - needed by the class tree to render the correct tabs - not an ideal solution..

Revision 21335 - Directory Listing
Modified Fri Jan 21 23:39:18 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
delete some commented out code

Revision 21334 - Directory Listing
Modified Fri Jan 21 23:38:50 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added the sorting label as argument to the createICDCls

Revision 21333 - Directory Listing
Modified Fri Jan 21 23:38:33 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
some rearranging

Revision 21332 - Directory Listing
Modified Fri Jan 21 23:38:10 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
- refactored out all the UI part
- added an asyncCallback that is called after results are fetched

Revision 21331 - Directory Listing
Modified Fri Jan 21 23:36:45 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
the search grid has now autocomplete and highlighting

Revision 21330 - Directory Listing
Modified Fri Jan 21 23:36:00 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added a search box with autocomplete at the bottom of the panel to reduce number of duplicates created

Revision 21329 - Directory Listing
Modified Fri Jan 21 23:35:09 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
minor: increased size

Revision 21328 - Directory Listing
Modified Fri Jan 21 23:34:50 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added an async callback for the search. removed all the ui from the search proxy, and added some here

Revision 21327 - Directory Listing
Modified Fri Jan 21 23:33:49 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added search box with autocomplete

Revision 21326 - Directory Listing
Modified Fri Jan 21 23:33:11 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
added the sorting label as argument to the createICDCls

Revision 21324 - Directory Listing
Modified Fri Jan 21 04:17:21 2011 UTC (6 years, 9 months ago) by nyulas
Original Path: web-protege
Changed to the ICD CM:
-	Renamed the instances of Type and	added a new instance called GroupingOfConceptsType
-	Changed the type of the existing linearization view instances from ICDLinearizationView to LinearizationView
-	Created new subclass of Term called MultiDescriptionTerm
-	Created the following (non-functional) object properties: termTitle ,	termDefinition ,	termSynonym

Changes to ICTM CM:
- renamed TM specific Type instances
- made TraditionalMedicineEATerm subclass of MultiDescriptionTerm
- renamed and updated some of the value set instances (added multiple language title, definition and synonyms etc)


Revision 21293 - Directory Listing
Modified Wed Jan 19 02:07:57 2011 UTC (6 years, 9 months ago) by nyulas
Original Path: web-protege
Updated some of the ICTM value set instances

Revision 21283 - Directory Listing
Modified Thu Jan 13 07:08:30 2011 UTC (6 years, 9 months ago) by nyulas
Original Path: web-protege
Fixed all TM term instance names, most of their rdfs:label and icd:label, some class names, some properties' range, removed instances of MotherLifeCycleConditionTerm from being also direct instances of LifeCycleConditionTerm.

Revision 21272 - Directory Listing
Modified Wed Jan 12 18:56:43 2011 UTC (6 years, 9 months ago) by tu
Original Path: web-protege
Updated ICTM Content Model so that it is consistent with Content Model - Patterns and Diagnosis - v3.4.2_Stanford.doc

Revision 21205 - Directory Listing
Modified Fri Jan 7 20:32:32 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
latest version of icd_content_model and ictm_content_model from icatdemo as of Jan 7, 2010

Revision 21204 - Directory Listing
Modified Fri Jan 7 20:32:00 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
replaced with what we use on icatdemo

Revision 21203 - Directory Listing
Modified Fri Jan 7 20:31:44 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
replaced with what we use on icatdemo

Revision 21200 - Directory Listing
Modified Fri Jan 7 02:10:41 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
forgot to add in stage.war the copy of the lucene jars to the war folder..

Revision 21199 - Directory Listing
Modified Fri Jan 7 01:48:50 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
making the default 20 entries for showing the change tracking

Revision 21198 - Directory Listing
Modified Fri Jan 7 01:21:09 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
add the lucene jars when building the webapp

Revision 21197 - Directory Listing
Modified Fri Jan 7 01:20:23 2011 UTC (6 years, 9 months ago) by tudorache
Original Path: web-protege
removed lucene jars - they are now added by the build process

Revision 21162 - Directory Listing
Modified Mon Jan 3 19:59:26 2011 UTC (6 years, 9 months ago) by saeedhp
Original Path: web-protege
jan 2011 fix

Revision 21140 - Directory Listing
Modified Thu Dec 23 16:17:17 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
enabling the lucene search

Revision 21131 - Directory Listing
Modified Wed Dec 22 11:01:25 2010 UTC (6 years, 10 months ago) by zeeshan
Original Path: web-protege
Updated Facebook login functionality. 

Revision 21130 - Directory Listing
Modified Sat Dec 18 22:58:32 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added util method to get the remote project name - only works if the server is still up

Revision 21129 - Directory Listing
Modified Sat Dec 18 22:55:42 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
-added a session lost listener, so that the client (tomcat) will not fill the logs with cannot connect exceptions. Now, if sessions lost is throws, WebProtege will shutdown all the projects. TODO: give a comprehensible message to the user.

Revision 21117 - Directory Listing
Modified Thu Dec 16 02:27:16 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
replace Functional Properties -> Functioning Properties at the request of Cille, and to be the same with the users guide

Revision 21025 - Directory Listing
Modified Wed Dec 8 07:35:07 2010 UTC (6 years, 10 months ago) by zeeshan
Original Path: web-protege
Updated Login window size to accommodate Facebook widget

Revision 21024 - Directory Listing
Modified Wed Dec 8 05:13:19 2010 UTC (6 years, 10 months ago) by nyulas
Original Path: web-protege
Fixed the configuration files, because we used wrong property values in the previous version commit

Revision 21023 - Directory Listing
Modified Wed Dec 8 04:42:11 2010 UTC (6 years, 10 months ago) by nyulas
Original Path: web-protege
Changed value options for Zang Fu for organs to checkboxes instead of radio buttons

Revision 21016 - Directory Listing
Modified Tue Dec 7 03:36:11 2010 UTC (6 years, 10 months ago) by nyulas
Original Path: web-protege
Extended width of the language column to comfortably fit the column header

Revision 21015 - Directory Listing
Modified Tue Dec 7 03:34:59 2010 UTC (6 years, 10 months ago) by nyulas
Original Path: web-protege
Changed header of the triple etiology section from "Etiology Type (Triple Etiology Doctrine)" to "TM Etiology (Triple Etiology Doctrine)" on the suggestion of Bedirhan

Revision 21009 - Directory Listing
Modified Mon Dec 6 18:26:58 2010 UTC (6 years, 10 months ago) by elliott
Original Path: web-protege
Updating metaproject to point to the pizza pprj file rather than the pizza owl file.

Revision 21006 - Directory Listing
Modified Mon Dec 6 05:30:29 2010 UTC (6 years, 10 months ago) by zeeshan
Original Path: web-protege
Added property 'facebook.app.api.key' in protege.properties and Jar facebook4gwt.jar

Revision 21005 - Directory Listing
Modified Mon Dec 6 05:27:09 2010 UTC (6 years, 10 months ago) by zeeshan
Original Path: web-protege
Added Facebook login and associating it with Webprotege account functionalities.


Revision 20994 - Directory Listing
Modified Sat Dec 4 01:44:56 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added language to the synonym

Revision 20989 - Directory Listing
Modified Sat Dec 4 00:38:22 2010 UTC (6 years, 10 months ago) by elliott
Original Path: web-protege
correcting issue with test cases.

Revision 20982 - Directory Listing
Modified Fri Dec 3 23:57:22 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
changed style for the body system rules - might need to be adjusted later, i don't like how they look

Revision 20981 - Directory Listing
Modified Fri Dec 3 23:43:03 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
- added to the Clinical Description Tab the Tm body systems:
 - Zan Fu Viscera System 
 - Sanjiao
 - Meridians
 
- added rulers

Revision 20980 - Directory Listing
Modified Fri Dec 3 23:30:40 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
changed title to match new CM

Revision 20979 - Directory Listing
Modified Fri Dec 3 23:30:28 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added new rulers for body systems

Revision 20978 - Directory Listing
Modified Fri Dec 3 23:10:29 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
- renamed Traditional Theory Tab -> Patterns
- removed Patterns of Zan Fu Organs (to be moved to Body Systems)
- added ruler Four Divisions

Revision 20977 - Directory Listing
Modified Fri Dec 3 22:53:48 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added ruler four divisions

Revision 20976 - Directory Listing
Modified Fri Dec 3 22:46:01 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
ruler for WM Etiology in the Causal Properties Tab

Revision 20975 - Directory Listing
Modified Fri Dec 3 22:45:26 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added ruler for WM Etiology in the Causal Properties Tab

Revision 20974 - Directory Listing
Modified Fri Dec 3 22:36:25 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added the TM triple etiology to the Causal Properties tab

Revision 20973 - Directory Listing
Modified Fri Dec 3 22:28:30 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
change the types_any for Causal Properties Tab

Revision 20969 - Directory Listing
Modified Fri Dec 3 19:40:31 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
fixed a comment that would show up in the browser

Revision 20968 - Directory Listing
Modified Fri Dec 3 19:37:57 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
took out the export icon and text

Revision 20967 - Directory Listing
Modified Fri Dec 3 19:36:28 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
set height of the type widget to 170 - one more type (pattern tm)

Revision 20966 - Directory Listing
Modified Fri Dec 3 19:31:10 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
Changes suggested by Samson and Mark:

Mark suggests that we rename the tab as "External Reviews"  to make the meaning more precise. Export and Import tab probably should go, as it's not usable with ICTM at this time.

In the ICTM Content Tab, Temporal, Severity, and Functional properties probably should go, as they are not mentioned in the ICTM content model, and their applicability to TM is questionable.

Renaming the "Diagnostic Criteria" to "Diagnostic Method" would more accurately the character of the terms that Molly placed under "Diagnositic Criteria" in the CM.


Revision 20965 - Directory Listing
Modified Fri Dec 3 02:58:57 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
uncommented the project BP reference configurations

Revision 20964 - Directory Listing
Modified Fri Dec 3 02:25:02 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
increasing the size of the porltets on the MyICTM Tab

Revision 20963 - Directory Listing
Modified Fri Dec 3 02:23:53 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added the icons

Revision 20962 - Directory Listing
Modified Fri Dec 3 02:13:42 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
fixed the sizes of the cols in the codes widget

Revision 20961 - Directory Listing
Modified Fri Dec 3 02:09:03 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
fixing the codes widget - it broke everything before..

Revision 20960 - Directory Listing
Modified Fri Dec 3 02:01:11 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
reverted the indexes

Revision 20959 - Directory Listing
Modified Fri Dec 3 01:59:29 2010 UTC (6 years, 10 months ago) by elliott
Original Path: web-protege
Changed value of variable to multi-value, to better construct the BioPortalSearchComponents.

Revision 20958 - Directory Listing
Modified Fri Dec 3 01:51:31 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
fixing the indexes of the widgets in the Title&Definition Tab

Revision 20957 - Directory Listing
Modified Fri Dec 3 01:45:43 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
- commenting out fully specified name and long definition
- made definition bigger

Revision 20956 - Directory Listing
Modified Fri Dec 3 01:39:37 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
changed the size of the statistics

Revision 20955 - Directory Listing
Modified Fri Dec 3 01:23:58 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
added treatment section back

Revision 20954 - Directory Listing
Modified Fri Dec 3 01:21:25 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
renamed some of the labels in the Traditional Medicine tab by Molly's email from 2010.12.02

Revision 20953 - Directory Listing
Modified Fri Dec 3 01:19:38 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
replaced "Patterns of Qi, Blood, Fluid" with "Essential Substances"

Revision 20952 - Directory Listing
Modified Fri Dec 3 01:19:13 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
Replaced Factor-Based Diagnosis with "8 Principles"

Revision 20951 - Directory Listing
Modified Fri Dec 3 00:52:57 2010 UTC (6 years, 10 months ago) by tudorache
Original Path: web-protege
fix for deadlock when a project is closed on the server

Revision 20948 - Directory Listing
Modified Thu Dec 2 19:05:55 2010 UTC (6 years, 10 months ago) by nyulas
Original Path: web-protege
Synchronized with configuratin_ICD.xml rev. 20730 plus updated for iCAMP-TM in Tokyo, Dec. 2010. 
Needs to be tested!

Main modification:
- removed ICD 10 code
- title & full name may have multiple values and are displayed in instance grids
- definition and long definition allow multiple values 
- language column added to title, full name, definition and long definition
- new category type "Pattern (TM)" was added

Revision 20929 - Directory Listing
Modified Tue Nov 30 22:23:30 2010 UTC (6 years, 10 months ago) by elliott
Original Path: web-protege
Correcting problem when we would sometimes call replaceExternalReference rather than createExternalReference.

Revision 20928 - Directory Listing
Modified Tue Nov 30 20:04:58 2010 UTC (6 years, 10 months ago) by elliott
Original Path: web-protege
Adding extra call to morph user so that calls to replaceExternalReference will now add changes with the correct user.

Revision 20914 - Directory Listing
Modified Mon Nov 29 21:16:14 2010 UTC (6 years, 10 months ago) by faigle
Original Path: web-protege


Revision 20913 - Directory Listing
Modified Mon Nov 29 14:59:34 2010 UTC (6 years, 10 months ago) by faigle
Original Path: web-protege


Revision 20911 - Directory Listing
Modified Thu Nov 25 00:52:55 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20910 - Directory Listing
Modified Thu Nov 25 00:34:38 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
should not be in svn

Revision 20909 - Directory Listing
Modified Thu Nov 25 00:34:28 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
should not be in svn

Revision 20908 - Directory Listing
Modified Thu Nov 25 00:34:17 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
should not be in svn

Revision 20907 - Directory Listing
Modified Thu Nov 25 00:34:08 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
should not be in svn

Revision 20906 - Directory Listing
Modified Thu Nov 25 00:19:19 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20905 - Directory Listing
Modified Wed Nov 24 06:59:58 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
Popup-Problem

Revision 20902 - Directory Listing
Modified Mon Nov 22 09:31:45 2010 UTC (6 years, 11 months ago) by faigle
Original Path: web-protege


Revision 20885 - Directory Listing
Modified Sat Nov 20 03:03:25 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
disabling lucene for now

Revision 20884 - Directory Listing
Modified Sat Nov 20 03:01:41 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
prevent calls to the server - especially for getSubclasses

Revision 20883 - Directory Listing
Modified Sat Nov 20 03:01:14 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
- code optimizations
- fix for the annotations notifications (to be tested)

Revision 20882 - Directory Listing
Modified Sat Nov 20 03:00:41 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
removed calls to the server for retrieving the user and ontology component

Revision 20881 - Directory Listing
Modified Sat Nov 20 03:00:10 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
imports and fix me comments

Revision 20877 - Directory Listing
Modified Sat Nov 20 01:18:35 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
removed commented code

Revision 20875 - Directory Listing
Modified Sat Nov 20 00:51:51 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
removed @override

Revision 20874 - Directory Listing
Modified Fri Nov 19 23:47:12 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Clean-up ONLY!
(This is really just the same as rev. 20873, and when checking for changes this revision should be compared with the versions prior to rev. 20873)

Revision 20873 - Directory Listing
Modified Fri Nov 19 23:39:55 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Major refactor for AbstractFieldWidget, InstanceTextFieldWidget and ICDTitleWidget. Some files need clean-up

Revision 20872 - Directory Listing
Modified Fri Nov 19 23:32:32 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Replaced "/" with File.separator so that file paths are OS-independent

Revision 20870 - Directory Listing
Modified Fri Nov 19 17:12:53 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Correcting issue found with manage value set hierarchy tab. Was not creating classes with spaces properly.

Revision 20869 - Directory Listing
Modified Fri Nov 19 17:04:52 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding extra check when adding current class to the list of superclasses.

Revision 20862 - Directory Listing
Modified Thu Nov 18 22:39:19 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding call to morphUser to make sure that createInstanceValueWithPropertyValue will create users with the right username.

Revision 20861 - Directory Listing
Modified Thu Nov 18 22:38:12 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Checking in fix for bug that saw ontology changes get occassionally dropped if they were fetched at the same time as note changes.

Revision 20860 - Directory Listing
Modified Thu Nov 18 17:36:53 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
tomcat specific information put into settings.xml

Revision 20859 - Directory Listing
Modified Thu Nov 18 17:17:52 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
change of server port and password for tomcat

Revision 20858 - Directory Listing
Modified Thu Nov 18 17:12:09 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20857 - Directory Listing
Modified Thu Nov 18 17:10:34 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
problems with special characters e.g. é in Protégé.

Revision 20851 - Directory Listing
Modified Wed Nov 17 17:07:27 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Removing the dependency of the ICPS project on the patched ICD jar.  Added the create_icd_specific configuration parameter to the ManageHierarchyPortlet and the ICDClassTreePortlet. Also added the inherit_metaclasses parameter to the ClassTreePortlet.

Revision 20848 - Directory Listing
Modified Wed Nov 17 02:35:02 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
build the ui only after render to make sure that the portlet configuration has been read. need a generic method to deal with this.

Revision 20841 - Directory Listing
Modified Wed Nov 17 00:51:19 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
made the portlet configurable: added config flag if create class is enabled, change parent enabled, retire enabled

Revision 20838 - Directory Listing
Modified Tue Nov 16 23:32:56 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
made the getFeedbackText protected

Revision 20801 - Directory Listing
Modified Fri Nov 12 20:40:21 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Cleaning up the transaction handling in the createInstanceValueWithPropertyValue method.

Revision 20800 - Directory Listing
Modified Fri Nov 12 20:30:50 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Wrapping calls to createInstanceValue and addPropertyValue in createInstancePropertyValue method in a transaction.

Revision 20794 - Directory Listing
Modified Fri Nov 12 19:06:26 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
Update for C.F.

Revision 20793 - Directory Listing
Modified Fri Nov 12 19:05:25 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Fixing bug when adding a new instance text field value. Previously did not save a change when first creating the instance (though it would save changes properly on modification). This is now fixed.

Revision 20783 - Directory Listing
Modified Thu Nov 11 17:40:08 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Introducing first refactor of the Watched Entities Cache.

Revision 20779 - Directory Listing
Modified Wed Nov 10 22:38:29 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
add/delete "short description"

Revision 20778 - Directory Listing
Modified Wed Nov 10 07:10:33 2010 UTC (6 years, 11 months ago) by tredmond
Original Path: web-protege
missing svn:ignores.


Revision 20776 - Directory Listing
Modified Tue Nov 9 23:33:25 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Now informs users of ontology changes if they are only watching a class and annotation changes if they are watching a branch.

Revision 20773 - Directory Listing
Modified Tue Nov 9 18:09:19 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Ugrading icd.jar and removing all references to old plugin in the build.xml.

Revision 20765 - Directory Listing
Modified Mon Nov 8 07:08:02 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
search does not use lucene anymore :(( Lucene is not yet ready - needs to be fixed and then we can use it

Revision 20764 - Directory Listing
Modified Mon Nov 8 07:05:14 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
took out from manifest the icd lucene index updater - lucene is not ready yet for the release

Revision 20761 - Directory Listing
Modified Mon Nov 8 06:02:07 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
formatting.. things should be in their right place..

Revision 20760 - Directory Listing
Modified Mon Nov 8 06:00:55 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
formatting

Revision 20759 - Directory Listing
Modified Mon Nov 8 05:15:21 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
updated lucene.jar with custom code (not in svn)

Revision 20753 - Directory Listing
Modified Mon Nov 8 03:12:31 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the replace description string

Revision 20751 - Directory Listing
Modified Mon Nov 8 00:14:48 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
updated icd.jar

Revision 20750 - Directory Listing
Modified Mon Nov 8 00:10:06 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
changed padding the ugly way

Revision 20749 - Directory Listing
Modified Sun Nov 7 23:59:31 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
other welcome page icons

Revision 20748 - Directory Listing
Modified Sun Nov 7 23:59:17 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
using different icons

Revision 20747 - Directory Listing
Modified Sun Nov 7 23:59:05 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
increased padding for the icd export panel

Revision 20746 - Directory Listing
Modified Sun Nov 7 23:58:31 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added padding to the export image

Revision 20740 - Directory Listing
Modified Sun Nov 7 22:18:22 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Fixed "Add value" message in transaction string.

Revision 20739 - Directory Listing
Modified Sun Nov 7 16:02:48 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the operation description text

Revision 20737 - Directory Listing
Modified Sun Nov 7 15:33:18 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
replaced spaces with %20 in the url that we send in the notification email... not the best solution. need to figure out how to make the real URL encoding

Revision 20736 - Directory Listing
Modified Sun Nov 7 15:25:02 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
stats from Nov. 7 2010

Revision 20735 - Directory Listing
Modified Sun Nov 7 15:22:20 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added logging message before and after ICD export

Revision 20734 - Directory Listing
Modified Sun Nov 7 15:09:40 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
minor text change

Revision 20733 - Directory Listing
Modified Sun Nov 7 14:28:48 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed link for export doc

Revision 20732 - Directory Listing
Modified Sun Nov 7 14:15:57 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
minor: corrections to the export confirmation text

Revision 20731 - Directory Listing
Modified Sun Nov 7 14:11:51 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
new icons

Revision 20730 - Directory Listing
Modified Sun Nov 7 14:10:16 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
hide the watches widget, show instead the stats

Revision 20729 - Directory Listing
Modified Sun Nov 7 14:09:45 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
using some images for the main actions

Revision 20728 - Directory Listing
Modified Sun Nov 7 03:12:49 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
adding the xls icon

Revision 20727 - Directory Listing
Modified Sun Nov 7 03:06:37 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the getWatchedType method to the cache.. it should have been here and not in the ontology service impl

Revision 20726 - Directory Listing
Modified Sun Nov 7 03:05:59 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
- fix for getRoot to also add the watches for the root
- getSubclasses now uses a utility to get the user in session

Revision 20725 - Directory Listing
Modified Sun Nov 7 03:04:58 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added getUserInSession - could not find the appropriate util class, so it is here

Revision 20724 - Directory Listing
Modified Sun Nov 7 03:04:01 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
logs for the notification time

Revision 20723 - Directory Listing
Modified Sun Nov 7 02:30:14 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the spreadsheet download link in the change description

Revision 20700 - Directory Listing
Modified Fri Nov 5 16:50:14 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Changed package of the ExportICDClassesJob.

Revision 20683 - Directory Listing
Modified Thu Nov 4 14:55:02 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Making date format 24 hour time.

Revision 20680 - Directory Listing
Modified Thu Nov 4 07:05:26 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
remove the delete button

Revision 20679 - Directory Listing
Modified Thu Nov 4 06:59:21 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the export branch change description ..

Revision 20678 - Directory Listing
Modified Thu Nov 4 06:57:56 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the export branch change description (to JE: why did you export the full class name?)

Revision 20677 - Directory Listing
Modified Thu Nov 4 06:48:45 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
weird: use kb.beginTransaction(abc) and kb.beginTransaction(abc, frame) do not behave as expected. Using the former, because it seems to work

Revision 20676 - Directory Listing
Modified Thu Nov 4 06:47:42 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
attached the move description to the right class

Revision 20675 - Directory Listing
Modified Thu Nov 4 06:47:32 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
attached the move description to the right class

Revision 20674 - Directory Listing
Modified Thu Nov 4 06:07:59 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed texts

Revision 20673 - Directory Listing
Modified Thu Nov 4 04:55:06 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
comment out the getWatchedEntities

Revision 20672 - Directory Listing
Modified Thu Nov 4 04:51:35 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
changed the message, mask while exporting

Revision 20671 - Directory Listing
Modified Thu Nov 4 04:17:19 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
minor, log message

Revision 20670 - Directory Listing
Modified Thu Nov 4 04:16:45 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
replace quotes for export for real

Revision 20669 - Directory Listing
Modified Thu Nov 4 04:16:17 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
replace quotes for export

Revision 20668 - Directory Listing
Modified Thu Nov 4 04:12:42 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
minor

Revision 20667 - Directory Listing
Modified Thu Nov 4 04:09:48 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
minor

Revision 20663 - Directory Listing
Modified Thu Nov 4 02:41:18 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the code... added confirmation dailog for the export.

Revision 20661 - Directory Listing
Modified Thu Nov 4 02:26:22 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the path for he download

Revision 20660 - Directory Listing
Modified Thu Nov 4 01:14:13 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Adopted paradigms implemented in other classes:
- in order to use the PropertyValueUtil class and 
- to use in all the callbacks the subject selected at the time of the remote call, not at the time the call back is happening

Revision 20658 - Directory Listing
Modified Thu Nov 4 00:45:33 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding changes update after the export.

Revision 20657 - Directory Listing
Modified Thu Nov 4 00:44:16 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
style for the icd export link

Revision 20656 - Directory Listing
Modified Thu Nov 4 00:43:57 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the export icon

Revision 20654 - Directory Listing
Modified Thu Nov 4 00:23:46 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the download link

Revision 20653 - Directory Listing
Modified Thu Nov 4 00:16:34 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
ripped out the export button - forgot something

Revision 20652 - Directory Listing
Modified Thu Nov 4 00:16:14 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
ripped out the export button

Revision 20651 - Directory Listing
Modified Thu Nov 4 00:13:40 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the export import tab

Revision 20650 - Directory Listing
Modified Thu Nov 4 00:12:43 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added styles for the icd export / import porlet

Revision 20649 - Directory Listing
Modified Thu Nov 4 00:11:47 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
made the icd export method more readable

Revision 20648 - Directory Listing
Modified Thu Nov 4 00:11:28 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
made it work with relative paths

Revision 20647 - Directory Listing
Modified Thu Nov 4 00:11:16 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
renamed the icd export method

Revision 20646 - Directory Listing
Modified Thu Nov 4 00:10:51 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
the icd export import portlet

Revision 20645 - Directory Listing
Modified Thu Nov 4 00:10:34 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added the icd import/export portlet

Revision 20644 - Directory Listing
Modified Thu Nov 4 00:10:21 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
change the icd export prop name

Revision 20643 - Directory Listing
Modified Thu Nov 4 00:07:09 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
removed arg from icd export

Revision 20641 - Directory Listing
Modified Wed Nov 3 23:33:14 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding timing to the final logging call.

Revision 20639 - Directory Listing
Modified Wed Nov 3 19:45:45 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Tweaking log message.

Revision 20638 - Directory Listing
Modified Wed Nov 3 19:05:20 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding logging messages before and after the NSS run.

Revision 20637 - Directory Listing
Modified Wed Nov 3 19:04:14 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
just a null check for getDisplayText

Revision 20636 - Directory Listing
Modified Wed Nov 3 19:03:54 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
a lot of work on the change description - might still need refinement

Revision 20635 - Directory Listing
Modified Wed Nov 3 19:03:19 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
pretty minor, change the change description string - still needs work, it doesn't show the old value

Revision 20634 - Directory Listing
Modified Wed Nov 3 19:02:33 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Export to .xls file now works much better with IE after changing MIME type of the download to application/vnd.ms-excel.

Revision 20633 - Directory Listing
Modified Wed Nov 3 19:02:26 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
updateInstanceValue - not good, needs to be fixed - impacts the change message for linearization changes

Revision 20625 - Directory Listing
Modified Tue Nov 2 19:58:08 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Generating better name for file name.

Revision 20624 - Directory Listing
Modified Tue Nov 2 19:24:55 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Setting logging level to fine.

Revision 20622 - Directory Listing
Modified Tue Nov 2 18:58:17 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
cleanup of the exportICDBranch method.

Revision 20616 - Directory Listing
Modified Tue Nov 2 01:34:24 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding first cut of export functionality.

Revision 20609 - Directory Listing
Modified Mon Nov 1 20:17:34 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
update cobertura plugin

Revision 20608 - Directory Listing
Modified Mon Nov 1 20:16:13 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20607 - Directory Listing
Modified Mon Nov 1 19:46:50 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20606 - Directory Listing
Modified Mon Nov 1 19:46:34 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20605 - Directory Listing
Modified Mon Nov 1 19:26:11 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20604 - Directory Listing
Modified Mon Nov 1 19:25:48 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20603 - Directory Listing
Modified Mon Nov 1 19:14:33 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20602 - Directory Listing
Modified Mon Nov 1 19:14:07 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20601 - Directory Listing
Modified Mon Nov 1 19:02:41 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
new snapshot version to invoke code coverage measurement

Revision 20600 - Directory Listing
Modified Mon Nov 1 18:47:06 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
new snapshot version to invoke code coverage measurement

Revision 20599 - Directory Listing
Modified Mon Nov 1 15:55:45 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
now integrate old JUnit tests

Revision 20598 - Directory Listing
Modified Fri Oct 29 22:55:13 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
fix bug with xpath in TestICat

Revision 20596 - Directory Listing
Modified Fri Oct 29 22:37:58 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
debugging of TestICat

Revision 20595 - Directory Listing
Modified Fri Oct 29 22:11:55 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
fix bug with xpath in TestICat

Revision 20592 - Directory Listing
Modified Fri Oct 29 20:25:46 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
Class converted from JUnit to TestNG

Revision 20590 - Directory Listing
Modified Fri Oct 29 20:18:08 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
additional test case.

Revision 20589 - Directory Listing
Modified Fri Oct 29 20:01:58 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
undeploy added to pom.xml

Revision 20588 - Directory Listing
Modified Fri Oct 29 19:46:15 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
Update of test suite

Revision 20587 - Directory Listing
Modified Fri Oct 29 19:38:32 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
First automated UI test for iCAT

Revision 20578 - Directory Listing
Modified Fri Oct 29 15:58:52 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20577 - Directory Listing
Modified Fri Oct 29 15:54:45 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
try to avoid development mode on server

Revision 20570 - Directory Listing
Modified Thu Oct 28 23:38:10 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
several updates for OS compatibility reasons

Revision 20567 - Directory Listing
Modified Thu Oct 28 01:18:16 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
added some comments for Jack

Revision 20565 - Directory Listing
Modified Thu Oct 28 00:46:21 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
fixed the replaceExternalReference

Revision 20564 - Directory Listing
Modified Thu Oct 28 00:46:01 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
seems minor

Revision 20563 - Directory Listing
Modified Thu Oct 28 00:45:19 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
- changed the delete transaction string
- setting the property browser text to the field label, should be a good default, better than previous behaviour (use long property name)
- should be changed later, if the behaviour is undesirable

Revision 20562 - Directory Listing
Modified Thu Oct 28 00:44:42 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
- setting the property browser text to the field label, should be a good default, better than previous behaviour (use long property name)
- should be changed later, if the behaviour is undesirable

Revision 20560 - Directory Listing
Modified Thu Oct 28 00:43:42 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
refactored it out from BioPortalSearchComponent

Revision 20559 - Directory Listing
Modified Thu Oct 28 00:43:21 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
- rearranged several things here
- made class fields private
- moved methods to their place
- changed the transaction strings - moved them into methods
- the import functionality should not be here!! To be fixed in future versions. should use a callback
- refactored the DefaultSearchString in its own class

Revision 20547 - Directory Listing
Modified Wed Oct 27 21:31:55 2010 UTC (6 years, 11 months ago) by nyulas
Original Path: web-protege
Fixed bug allowing multiple entries to be added using a combobox widget, when selecting a different subject.

Revision 20545 - Directory Listing
Modified Wed Oct 27 19:38:35 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
now with integration tests again

Revision 20544 - Directory Listing
Modified Wed Oct 27 19:28:07 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20543 - Directory Listing
Modified Wed Oct 27 19:25:09 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
exclude integration tests for a moment

Revision 20542 - Directory Listing
Modified Wed Oct 27 19:15:23 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
excluding certain tests, updating Tests

Revision 20540 - Directory Listing
Modified Wed Oct 27 17:52:07 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20538 - Directory Listing
Modified Wed Oct 27 16:54:31 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20537 - Directory Listing
Modified Wed Oct 27 16:15:20 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
optimization of documenttation

Revision 20534 - Directory Listing
Modified Wed Oct 27 00:51:47 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Removing redundant parameter.

Revision 20533 - Directory Listing
Modified Wed Oct 27 00:47:05 2010 UTC (6 years, 11 months ago) by elliott
Original Path: web-protege
Adding check to see if a user's email address is null or not.

Revision 20532 - Directory Listing
Modified Wed Oct 27 00:23:39 2010 UTC (6 years, 11 months ago) by tudorache
Original Path: web-protege
null check for the email address

Revision 20501 - Directory Listing
Modified Tue Oct 26 20:19:28 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20500 - Directory Listing
Modified Tue Oct 26 20:17:52 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20499 - Directory Listing
Modified Tue Oct 26 20:05:59 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20497 - Directory Listing
Modified Tue Oct 26 19:48:24 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20496 - Directory Listing
Modified Tue Oct 26 19:37:39 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20495 - Directory Listing
Modified Tue Oct 26 19:36:22 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20494 - Directory Listing
Modified Tue Oct 26 19:33:57 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
discard undeploy

Revision 20493 - Directory Listing
Modified Tue Oct 26 19:30:10 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege


Revision 20492 - Directory Listing
Modified Tue Oct 26 19:24:49 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
Selenium tests parametrized

Revision 20491 - Directory Listing
Modified Tue Oct 26 18:15:48 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
compile error fixed

Revision 20490 - Directory Listing
Modified Tue Oct 26 18:04:23 2010 UTC (6 years, 11 months ago) by johner
Original Path: web-protege
selenium made customizable

Revision 20485 - Directory Listing
Modified Tue Oct 26 00:10:28 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20483 - Directory Listing
Modified Mon Oct 25 23:53:59 2010 UTC (7 years ago) by johner
Original Path: web-protege
fixed xml error

Revision 20482 - Directory Listing
Modified Mon Oct 25 23:53:07 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20481 - Directory Listing
Modified Mon Oct 25 23:43:09 2010 UTC (7 years ago) by johner
Original Path: web-protege
different test setup

Revision 20475 - Directory Listing
Modified Mon Oct 25 21:46:12 2010 UTC (7 years ago) by johner
Original Path: web-protege
after first successful build

Revision 20474 - Directory Listing
Modified Mon Oct 25 21:39:10 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Adding transaction support to the replaceExternalReference method.

Revision 20473 - Directory Listing
Modified Mon Oct 25 21:01:45 2010 UTC (7 years ago) by johner
Original Path: web-protege
ggwt testing


Revision 20472 - Directory Listing
Modified Mon Oct 25 19:50:20 2010 UTC (7 years ago) by johner
Original Path: web-protege
starting with GWT testing

Revision 20471 - Directory Listing
Modified Mon Oct 25 19:48:48 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Adding documentation, initiating minor refactor and changing the transaction string. Also fixing the issue with the internal references not showing up as changes by setting the apply to field correctly.

Revision 20470 - Directory Listing
Modified Mon Oct 25 19:24:10 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20469 - Directory Listing
Modified Mon Oct 25 19:23:57 2010 UTC (7 years ago) by johner
Original Path: web-protege
start adding tests

Revision 20468 - Directory Listing
Modified Mon Oct 25 19:06:51 2010 UTC (7 years ago) by johner
Original Path: web-protege
tomcat in remote mode

Revision 20467 - Directory Listing
Modified Mon Oct 25 18:59:01 2010 UTC (7 years ago) by johner
Original Path: web-protege
w/o tests

Revision 20466 - Directory Listing
Modified Mon Oct 25 18:43:36 2010 UTC (7 years ago) by johner
Original Path: web-protege
new password in pom.xml

Revision 20465 - Directory Listing
Modified Mon Oct 25 18:24:39 2010 UTC (7 years ago) by johner
Original Path: web-protege
user credentials changed

Revision 20464 - Directory Listing
Modified Mon Oct 25 18:02:28 2010 UTC (7 years ago) by johner
Original Path: web-protege
change to pom.xml to enable Tomcat deploy

Revision 20454 - Directory Listing
Modified Fri Oct 22 04:50:08 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Fixed configuration for Short and Long Definition

Revision 20452 - Directory Listing
Modified Fri Oct 22 00:03:23 2010 UTC (7 years ago) by johner
Original Path: web-protege
update to junit 3.8.1

Revision 20451 - Directory Listing
Modified Fri Oct 22 00:00:29 2010 UTC (7 years ago) by johner
Original Path: web-protege
skip test for a moment

Revision 20450 - Directory Listing
Modified Thu Oct 21 23:40:40 2010 UTC (7 years ago) by johner
Original Path: web-protege
add gwt-crypto

Revision 20449 - Directory Listing
Modified Thu Oct 21 23:16:24 2010 UTC (7 years ago) by johner
Original Path: web-protege
additional dependencies resolved

Revision 20448 - Directory Listing
Modified Thu Oct 21 23:12:08 2010 UTC (7 years ago) by johner
Original Path: web-protege
update to Protege 3.4.5

Revision 20447 - Directory Listing
Modified Thu Oct 21 23:00:10 2010 UTC (7 years ago) by johner
Original Path: web-protege
bioportal added to pom.xml

Revision 20446 - Directory Listing
Modified Thu Oct 21 22:52:30 2010 UTC (7 years ago) by johner
Original Path: web-protege
updated pom.xml (latest libs as protege, protege-collab etc.

Revision 20445 - Directory Listing
Modified Thu Oct 21 22:33:21 2010 UTC (7 years ago) by johner
Original Path: web-protege
fixed: change-management.jar was twice in pom.xml

Revision 20444 - Directory Listing
Modified Thu Oct 21 22:20:13 2010 UTC (7 years ago) by johner
Original Path: web-protege
still tweeks with pom.xml

Revision 20443 - Directory Listing
Modified Thu Oct 21 21:35:17 2010 UTC (7 years ago) by johner
Original Path: web-protege
pom.xml change again for new artifacts. Now Nexus upload works

Revision 20442 - Directory Listing
Modified Thu Oct 21 20:39:37 2010 UTC (7 years ago) by johner
Original Path: web-protege
fixed minor problem

Revision 20441 - Directory Listing
Modified Thu Oct 21 20:31:13 2010 UTC (7 years ago) by johner
Original Path: web-protege
added jars (taken from Protege 3.4.4 download):
- bioportal
- lucene
- change management

Revision 20440 - Directory Listing
Modified Thu Oct 21 18:52:16 2010 UTC (7 years ago) by johner
Original Path: web-protege
icd corrected

Revision 20439 - Directory Listing
Modified Thu Oct 21 18:32:44 2010 UTC (7 years ago) by johner
Original Path: web-protege
javax.mail and icd added

Revision 20437 - Directory Listing
Modified Thu Oct 21 18:14:07 2010 UTC (7 years ago) by johner
Original Path: web-protege
still openid4java

Revision 20436 - Directory Listing
Modified Thu Oct 21 18:11:25 2010 UTC (7 years ago) by johner
Original Path: web-protege
adding lib openid4java

Revision 20435 - Directory Listing
Modified Thu Oct 21 16:56:18 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20434 - Directory Listing
Modified Thu Oct 21 15:59:31 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20433 - Directory Listing
Modified Thu Oct 21 15:59:05 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20432 - Directory Listing
Modified Thu Oct 21 15:56:03 2010 UTC (7 years ago) by johner
Original Path: web-protege
Removed special characters from file

Revision 20431 - Directory Listing
Modified Thu Oct 21 15:55:21 2010 UTC (7 years ago) by johner
Original Path: web-protege
Removed special characters from file

Revision 20430 - Directory Listing
Modified Wed Oct 20 23:15:00 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
refactored some methods

Revision 20429 - Directory Listing
Modified Wed Oct 20 23:05:33 2010 UTC (7 years ago) by johner
Original Path: web-protege
Initial check-in of pom-xml. Still contains errors

Revision 20428 - Directory Listing
Modified Wed Oct 20 22:56:20 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20427 - Directory Listing
Modified Wed Oct 20 22:46:30 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20426 - Directory Listing
Modified Wed Oct 20 22:46:15 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20425 - Directory Listing
Modified Wed Oct 20 22:42:44 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20424 - Directory Listing
Modified Wed Oct 20 22:37:55 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20423 - Directory Listing
Modified Wed Oct 20 22:36:35 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20422 - Directory Listing
Modified Wed Oct 20 22:35:54 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20421 - Directory Listing
Modified Wed Oct 20 22:28:37 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20420 - Directory Listing
Modified Wed Oct 20 22:23:15 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20419 - Directory Listing
Modified Wed Oct 20 22:22:20 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20418 - Directory Listing
Modified Wed Oct 20 22:21:55 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20417 - Directory Listing
Modified Wed Oct 20 22:21:37 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20416 - Directory Listing
Modified Wed Oct 20 22:21:19 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20415 - Directory Listing
Modified Wed Oct 20 22:20:38 2010 UTC (7 years ago) by johner
Original Path: web-protege


Revision 20414 - Directory Listing
Modified Wed Oct 20 22:19:11 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20413 - Directory Listing
Modified Wed Oct 20 22:18:13 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20412 - Directory Listing
Modified Wed Oct 20 22:12:57 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20411 - Directory Listing
Modified Wed Oct 20 20:27:19 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20410 - Directory Listing
Modified Wed Oct 20 19:52:38 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20409 - Directory Listing
Modified Wed Oct 20 19:52:21 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20408 - Directory Listing
Modified Wed Oct 20 19:48:01 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20407 - Directory Listing
Modified Wed Oct 20 19:37:14 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20406 - Directory Listing
Modified Wed Oct 20 19:35:28 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20405 - Directory Listing
Modified Wed Oct 20 19:33:52 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20404 - Directory Listing
Modified Wed Oct 20 19:32:38 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20403 - Directory Listing
Modified Wed Oct 20 19:16:42 2010 UTC (7 years ago) by johner
Original Path: web-protege
Change to new folder structure

Revision 20402 - Directory Listing
Modified Wed Oct 20 18:18:01 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Modified default search options for Body System so that all the possible values are shown.

Revision 20401 - Directory Listing
Modified Wed Oct 20 02:32:28 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
Branch for Cristian Johner to test the maven set up

Revision 20395 - Directory Listing
Modified Tue Oct 19 00:50:40 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Refactoring initialize method to the ClientApplicationPropertiesCache and 'wrapping' parts of the WebProtege and ICat so that they execute only after the properties have loaded.

Revision 20387 - Directory Listing
Modified Tue Oct 19 00:20:31 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Refactoring call to initialize to it's own method and changing the failure method to continue with checkAuthenType.

Revision 20386 - Directory Listing
Modified Mon Oct 18 23:47:33 2010 UTC (7 years ago) by elliott
Original Path: web-protege
[#2713] Creating new ClientApplicationPropertiesCache and introducing a callback mechanism in the ApplicationPropertiesServiceManager. This callback is used in the Authenticate entrypoint to overcome the timing problem that causes this bug.

Revision 20385 - Directory Listing
Modified Mon Oct 18 22:53:43 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Removing seperate compile.js.authenticate target. This is now taken care of by multiple arguments in the main compile.js target.

Revision 20384 - Directory Listing
Modified Mon Oct 18 22:29:38 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changed default compilation style to obfuscated - was pretty.

Revision 20375 - Directory Listing
Modified Fri Oct 15 17:05:25 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Readding the call to loginUtil.closeWindow for the https login functionality. This was causing problems when executing after opening windows from an email, but needed to be invoked if we logged in over https.

Revision 20374 - Directory Listing
Modified Fri Oct 15 02:13:44 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor Java 5

Revision 20373 - Directory Listing
Modified Fri Oct 15 02:10:16 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor Java 5

Revision 20372 - Directory Listing
Modified Fri Oct 15 01:45:35 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing footer text.

Revision 20369 - Directory Listing
Modified Thu Oct 14 21:35:11 2010 UTC (7 years ago) by tredmond
Original Path: web-protege
added one synchronize statement (around isLoaded) and some documentation.

Revision 20368 - Directory Listing
Modified Thu Oct 14 19:13:33 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Added blacklist of server projects to ensure that we don't end up marking some projects as 'notified' when they were originally unavailable.

Revision 20367 - Directory Listing
Modified Thu Oct 14 09:11:20 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fixed path to bell.png

Revision 20366 - Directory Listing
Modified Thu Oct 14 09:04:38 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor change of the intro text

Revision 20365 - Directory Listing
Modified Thu Oct 14 07:38:39 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
The new icat logos in orange - they are also compiled in from the ui package

Revision 20364 - Directory Listing
Modified Thu Oct 14 07:38:12 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
the new iCat.html that has a intro div. Used for the closed iCAT

Revision 20363 - Directory Listing
Modified Thu Oct 14 07:37:24 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fixed texts in dialogs..

Revision 20362 - Directory Listing
Modified Thu Oct 14 07:36:41 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
- fix for a concurrent modification exception
- added one more method for requestPermissions to support also a callback - although it might not be necessary

Revision 20361 - Directory Listing
Modified Thu Oct 14 07:35:35 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
copied the content to iCat.java

Revision 20360 - Directory Listing
Modified Thu Oct 14 07:35:22 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
new closed iCAT UI :(

Users have now to login upfront before getting to icat. 

Revision 20359 - Directory Listing
Modified Thu Oct 14 06:17:58 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
changed logging from info -> debug

Revision 20354 - Directory Listing
Modified Thu Oct 14 02:45:47 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Correcting problem seen in internet explorer with the .ico files not rendering correctly. These have been replaced with png files where appropriate.

Revision 20353 - Directory Listing
Modified Thu Oct 14 01:07:14 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing around spaces in the email footer

Revision 20352 - Directory Listing
Modified Thu Oct 14 00:24:06 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Cleaning up some email notifications code.
* Consolidated the application.url, application.port and application.path properties into the application.url property.
* Removed old application.port and application.path properties.
* Changed the footer for the notification email.

Revision 20351 - Directory Listing
Modified Thu Oct 14 00:02:40 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing email footer.

Revision 20341 - Directory Listing
Modified Wed Oct 13 21:21:05 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Removing calls to LoginUtil.closeWindow. This was causing the entire browser to shutdown when using Open Id after the browser was started from the links emailed out to us by the email thread.

Revision 20336 - Directory Listing
Modified Wed Oct 13 06:13:27 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
change intro text: "category" -> "class"

Revision 20335 - Directory Listing
Modified Wed Oct 13 06:13:05 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
enhancements of the watched menu and selection
various cleanups

Revision 20334 - Directory Listing
Modified Wed Oct 13 06:12:07 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor refactor of a method name

Revision 20333 - Directory Listing
Modified Wed Oct 13 06:11:36 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fixed the welcome message

Revision 20332 - Directory Listing
Modified Wed Oct 13 06:10:34 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor 

Revision 20331 - Directory Listing
Modified Wed Oct 13 02:20:17 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Restructured "Severity Properties" tab and added placeholder for Severity Scale.

Revision 20330 - Directory Listing
Modified Wed Oct 13 00:41:21 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Simplifying calls to WatchedEntitiesCache in the OntologyServiceImpl.

Revision 20324 - Directory Listing
Modified Tue Oct 12 23:40:41 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Added "Fully Specified Name" field to the "Title & Definition" tab

Revision 20323 - Directory Listing
Modified Tue Oct 12 23:32:31 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Cleaning up imports

Revision 20322 - Directory Listing
Modified Tue Oct 12 23:32:12 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Removing superfluous check.

Revision 20310 - Directory Listing
Modified Tue Oct 12 17:28:04 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing comments.

Revision 20309 - Directory Listing
Modified Tue Oct 12 17:23:14 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Adding extra (so far unneeded) null guard.

Revision 20308 - Directory Listing
Modified Tue Oct 12 16:35:35 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Correcting issue when users have no watches associated with them.

Revision 20299 - Directory Listing
Modified Mon Oct 11 22:40:41 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Implementing a read/write lock for the WatchedEntitiesCache.

Revision 20298 - Directory Listing
Modified Mon Oct 11 22:29:07 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Cleaning up access to the WatchedEntitiesCache.

Revision 20297 - Directory Listing
Modified Mon Oct 11 21:19:08 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing message formats initialization to a field so they are initialized once per class, not once per message.

Revision 20296 - Directory Listing
Modified Mon Oct 11 19:32:34 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Made the following changes to the email notification:
* Users are notified immediately by default.
* Added the NEVER notification interval.
* Added a postscript to the changes notification email.

Revision 20295 - Directory Listing
Modified Mon Oct 11 17:50:47 2010 UTC (7 years ago) by elliott
Original Path: web-protege
[2699] - Fixing problem with threads not shutting down properly when exiting WebProtege. We tried to dispose of the RemoteClientProject when shutting down WebProtege, but in fact this was never invoked (we only call dispose if the class was assignable from Disposable). By invoking the dispose method on the Project class on shutdown, we can gracefully exit those threads which are causing these warning messages to be printed.

Revision 20294 - Directory Listing
Modified Mon Oct 11 16:05:20 2010 UTC (7 years ago) by elliott
Original Path: web-protege
2698 - Correcting the add parents dialog being rendered as a blank dialog after using the x close button.

Revision 20284 - Directory Listing
Modified Fri Oct 8 01:50:59 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fix for concurrent modificaton exception

Revision 20283 - Directory Listing
Modified Fri Oct 8 01:50:42 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
Closed iCAT...

Revision 20274 - Directory Listing
Modified Thu Oct 7 00:15:47 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
adjust the options panel, if user in session is already set at init

Revision 20262 - Directory Listing
Modified Wed Oct 6 21:41:55 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Fixed the bug that caused the "remove" link in the "Change Parents" widget not to work in IE.

Revision 20258 - Directory Listing
Modified Wed Oct 6 19:56:56 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
in getSubProperties, also return rdfs:label and rdfs:comment for owl ontologies. need more generic solution

Revision 20257 - Directory Listing
Modified Wed Oct 6 19:56:23 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
moved the readonly to setup

Revision 20256 - Directory Listing
Modified Wed Oct 6 19:54:45 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
null check -- field should never be null! This is an initialization problem. To be fixed asap!

Revision 20255 - Directory Listing
Modified Wed Oct 6 19:54:13 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
make a check before delete about system properties

Revision 20254 - Directory Listing
Modified Wed Oct 6 19:53:55 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
made the value type column be of type object

Revision 20253 - Directory Listing
Modified Wed Oct 6 19:48:31 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
added the isSystem flag

Revision 20252 - Directory Listing
Modified Wed Oct 6 18:22:21 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
null check

Revision 20251 - Directory Listing
Modified Wed Oct 6 18:22:05 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
when log out, remove all the tabs

Revision 20245 - Directory Listing
Modified Wed Oct 6 06:33:46 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
changed constructor
handle duplicates

Revision 20244 - Directory Listing
Modified Wed Oct 6 06:33:08 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
add a system listener
changed constructor

Revision 20243 - Directory Listing
Modified Wed Oct 6 06:32:35 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
refactored the ontologies portlet

Revision 20242 - Directory Listing
Modified Wed Oct 6 06:31:47 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
added one method for login listener

Revision 20241 - Directory Listing
Modified Wed Oct 6 06:03:24 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
took out the check for user in session and moved it to webprotege.java

Revision 20240 - Directory Listing
Modified Wed Oct 6 06:02:55 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
restore user in session and then build ui

Revision 20239 - Directory Listing
Modified Wed Oct 6 05:47:43 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fixed some old code. Refresh ontologies list at login/logout/onRefresh

Revision 20238 - Directory Listing
Modified Tue Oct 5 21:52:22 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
synchronized the calls

Revision 20216 - Directory Listing
Modified Thu Sep 30 01:33:33 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Making the getMetaProject call synchronized. This was causing the starting of additional EventDispatchFrameStoreHandler threads.

Revision 20211 - Directory Listing
Modified Wed Sep 29 20:54:36 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Naming the starting thread, and setting it to be a daemon thread.

Revision 20210 - Directory Listing
Modified Wed Sep 29 20:46:59 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Updated configuration of the "Severity Properties" tab.

Revision 20209 - Directory Listing
Modified Wed Sep 29 20:32:00 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Added UI for Severity Properties

Revision 20206 - Directory Listing
Modified Wed Sep 29 08:08:00 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
hack for the search: use only Lucene
- to be reverted and fixed

Revision 20205 - Directory Listing
Modified Wed Sep 29 05:16:59 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
support prefix queries

Revision 20204 - Directory Listing
Modified Wed Sep 29 05:14:10 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Removed "(TO BE VERIFIED)" from "Functional Properties" tab

Revision 20197 - Directory Listing
Modified Tue Sep 28 21:10:20 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Moving Incident Characteristics to be the last tab, at the request of CN.

Revision 20196 - Directory Listing
Modified Tue Sep 28 20:41:31 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
fix for the reindexer

Revision 20192 - Directory Listing
Modified Tue Sep 28 16:05:59 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Updated the demo logo to the 'burned orange' color we're using for demo sites.

Revision 20182 - Directory Listing
Modified Tue Sep 28 10:05:50 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
new version of icd.jar that contains the project plugin for updating the index

Revision 20181 - Directory Listing
Modified Tue Sep 28 10:04:38 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
renamed getAllImplementedClasses -> getDirectTypes

Revision 20180 - Directory Listing
Modified Tue Sep 28 10:04:21 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20179 - Directory Listing
Modified Tue Sep 28 10:04:08 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20178 - Directory Listing
Modified Tue Sep 28 10:03:26 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
null pointer check

Revision 20177 - Directory Listing
Modified Tue Sep 28 10:02:49 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented setSelection

Revision 20176 - Directory Listing
Modified Tue Sep 28 10:02:23 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
minor

Revision 20175 - Directory Listing
Modified Tue Sep 28 10:01:58 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20174 - Directory Listing
Modified Tue Sep 28 10:01:24 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20173 - Directory Listing
Modified Tue Sep 28 10:00:44 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20172 - Directory Listing
Modified Tue Sep 28 10:00:07 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
renamed getAllImplementedClasses -> getDirectTypes

Revision 20171 - Directory Listing
Modified Tue Sep 28 09:59:10 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
added new constructor

Revision 20170 - Directory Listing
Modified Tue Sep 28 09:58:46 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
reimplemented the link and jump mechanism

Revision 20169 - Directory Listing
Modified Tue Sep 28 09:36:04 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
adding the lucene jars temporarily in webprotege - to be removed soon

Revision 20168 - Directory Listing
Modified Tue Sep 28 09:35:30 2010 UTC (7 years ago) by tudorache
Original Path: web-protege
adding the lucene jars temporarily in webprotege - to be removed soon

Revision 20166 - Directory Listing
Modified Tue Sep 28 02:08:22 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Fixing the labels not to show "terms" but always only "term".

Revision 20165 - Directory Listing
Modified Mon Sep 27 23:41:15 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Added fix for the gradual increase in the number of jobs, should a long-running transaction (like initialization on the reader/writers branch) lock the ontology for a while.

Revision 20164 - Directory Listing
Modified Mon Sep 27 22:52:01 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Reverted to previous revision, since the latest changes made by Jack do not seem to make sense to me (he may have introduced this in relation to some unnecessary changes in ClassInstanceReferenceWidget - need to be confirmed).

Revision 20163 - Directory Listing
Modified Mon Sep 27 22:03:53 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Added null check to fix linearizations on ICPS.

Revision 20162 - Directory Listing
Modified Mon Sep 27 21:59:12 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Added support for search with Lucene index.

Revision 20161 - Directory Listing
Modified Mon Sep 27 16:45:20 2010 UTC (7 years ago) by elliott
Original Path: web-protege
Changing the labels for the Instance Grid Widget. It now uses the preferred terminology "value" throughout. It also selects between plural/singular depending on whether or not the multivalue text field is enabled.

Revision 20158 - Directory Listing
Modified Sun Sep 26 23:40:38 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Fixed bug displaying "Add Term" and "Find Term" links in reversed order when multiple values are not allowed.

Revision 20157 - Directory Listing
Modified Sun Sep 26 22:15:40 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Moved images used from html files in a new place (under the html/images directory)

Revision 20156 - Directory Listing
Modified Sun Sep 26 07:34:42 2010 UTC (7 years ago) by nyulas
Original Path: web-protege
Added support for drop-down value list for instance grid columns.

Revision 20155 - Directory Listing
Modified Sat Sep 25 21:52:51 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
logging for transaction is fine

Revision 20153 - Directory Listing
Modified Sat Sep 25 21:16:42 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
added watched branch

Revision 20152 - Directory Listing
Modified Sat Sep 25 21:16:34 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
added watched branch

Revision 20151 - Directory Listing
Modified Sat Sep 25 21:15:25 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
reformatting, fixed java 5 issues, added suppress warnings where necessary, organized imports

Revision 20150 - Directory Listing
Modified Sat Sep 25 21:14:57 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
reformatting, fixed java 5 issues, added suppress warnings where necessary

Revision 20149 - Directory Listing
Modified Sat Sep 25 21:13:40 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
reorganized & reformatted to make more sense. still needs work. some properties need to be renamed

Revision 20148 - Directory Listing
Modified Sat Sep 25 21:12:57 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
minor reformatting

Revision 20147 - Directory Listing
Modified Sat Sep 25 21:11:53 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
reorganized to make more sense. some properties need to be renamed

Revision 20146 - Directory Listing
Modified Sat Sep 25 20:40:48 2010 UTC (7 years, 1 month ago) by tudorache
Original Path: web-protege
removed override

Revision 20142 - Directory Listing
Modified Fri Sep 24 22:05:00 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Now uses decodeComponent, rather than the decode method. Decode component does not seem to work properly.

Revision 20141 - Directory Listing
Modified Fri Sep 24 21:40:27 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Tweaking logic to trigger url decode.

Revision 20140 - Directory Listing
Modified Fri Sep 24 21:12:32 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing email jumping issue. This was caused by the url not being properly decoded by default, which it is in some GWT versions.

Revision 20139 - Directory Listing
Modified Fri Sep 24 20:00:52 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Cleaning up logging.

Revision 20138 - Directory Listing
Modified Fri Sep 24 19:47:23 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added more instructive logging.

Revision 20137 - Directory Listing
Modified Fri Sep 24 19:44:07 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing the mechanism used to stop the thread, now simply returns from the run method.

Revision 20136 - Directory Listing
Modified Fri Sep 24 16:33:56 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing the tab name and label name for the rdfs:label field.

Revision 20135 - Directory Listing
Modified Fri Sep 24 08:40:29 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Separated "External Causes" and "Injuries" as two separate category types.

Revision 20134 - Directory Listing
Modified Fri Sep 24 08:17:00 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
- Removed CUI column and renamed "Ontology ID" column to "Source" column in the "Title & Definition" tab
- Added "CLAML" prefix to the "Preferred" and "Preferred Long" labels in the "ICD 10 Notes and Hints" tab

Revision 20130 - Directory Listing
Modified Fri Sep 24 06:09:00 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Performance enhancement for by sorting the linearization instances on the server instead of on the client (which worked very slowly in IE)

Revision 20128 - Directory Listing
Modified Fri Sep 24 03:16:16 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Now uses a new widget for the rdfs:label.

Revision 20127 - Directory Listing
Modified Fri Sep 24 02:11:52 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
- Added widget for "short definition" to the the "Title and Definition" tab.
- Set the morphologically abnormal structure property to take values from the SNOMED-MAS view

Revision 20126 - Directory Listing
Modified Fri Sep 24 01:14:18 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changed diagnostic reference to search ICD 10.

Revision 20125 - Directory Listing
Modified Fri Sep 24 00:10:55 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Fixed annoying rendering bug in IE during value reload.

Solution: instead of changing the visibility of the "reload icon" back and forth from ON to OFF, now we reserve place for it at the first time the widgets are rendered using an invisible placeholder icon.

Revision 20124 - Directory Listing
Modified Fri Sep 24 00:05:31 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding note about the value sets into the welcome screen.

Revision 20123 - Directory Listing
Modified Thu Sep 23 22:57:41 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Increased label width in "Specific Condition Properties" tab to allow space for both help icon (to be added in the future) and "reload values" icon.

Revision 20118 - Directory Listing
Modified Thu Sep 23 22:55:38 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Fixed labels to show tooltips (and as  a side effect reload icon will be shown after the help icon)

Revision 20112 - Directory Listing
Modified Thu Sep 23 22:28:01 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing text of ICPS prod logo.

Revision 20111 - Directory Listing
Modified Thu Sep 23 22:13:27 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Changed labels in "Specific Conditions Propeperties" tab

Revision 20110 - Directory Listing
Modified Thu Sep 23 21:59:57 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Committing first cuts of the demo and prod logos.

Revision 20108 - Directory Listing
Modified Thu Sep 23 21:23:13 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Switching title and sorting label positions at the request of TT.

Revision 20107 - Directory Listing
Modified Thu Sep 23 21:11:06 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Support for user defined label width for InstanceCheckBoxWidgets (TODO: we should provide such support for all property widgets)

Revision 20105 - Directory Listing
Modified Thu Sep 23 18:44:33 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Label cleanup.

Revision 20104 - Directory Listing
Modified Thu Sep 23 17:13:37 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing text of medication event problem involved to problem involved (was process involved, a duplicate).

Revision 20103 - Directory Listing
Modified Thu Sep 23 01:43:14 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
- removed all editorial statuses except from the "Tile & Definition" tab
- removed "Snomed References" tab


Revision 20102 - Directory Listing
Modified Thu Sep 23 01:38:08 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing text of ontology notification labels as per CN's instructions.

Revision 20101 - Directory Listing
Modified Thu Sep 23 00:51:43 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding Infrastructure Or Building Or Fixture Event title term.

Revision 20100 - Directory Listing
Modified Thu Sep 23 00:26:20 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Removing all references to help text, as we are not allowed to use the same help text as ICD.

Revision 20099 - Directory Listing
Modified Wed Sep 22 22:53:51 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Orange logos to match the official ICD-11 color.

Revision 20098 - Directory Listing
Modified Wed Sep 22 21:49:27 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
converted the old JPEG file (which was actually a PNG file with a .jpg extension) to a real JPEG file.

Revision 20092 - Directory Listing
Modified Wed Sep 22 00:08:38 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Renamed the LabellingClassTreePortlet to LabelingClassTreePortlet (from BR English to AM English).

Revision 20091 - Directory Listing
Modified Tue Sep 21 23:11:15 2010 UTC (7 years, 1 month ago) by nyulas
Original Path: web-protege
Fixed Layout problems in Functional Impact tab in FF on Mac

Revision 20088 - Directory Listing
Modified Tue Sep 21 20:41:22 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added the Incident Characteristics tab and the associated sub-tabs (Incident Characteristics, Patient Characteristics, Origin, Discovery and Reporting).

Revision 20087 - Directory Listing
Modified Tue Sep 21 20:06:55 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Removing the Diagnostic Reference under the Class Value Set.

Revision 20086 - Directory Listing
Modified Tue Sep 21 20:02:37 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added the Diagnostic Reference to the Class Value Sets (I think that this was Samson's intention). Also changed the rdfs:label of Class Value Set.

Revision 20085 - Directory Listing
Modified Tue Sep 21 17:24:27 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Properly configured the Country properties; these referred to Country rather than having a seperate CountryTerm class that they referenced.

Revision 20081 - Directory Listing
Modified Mon Sep 20 22:52:00 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Manage Value Sets tab now has the ability to edit the rdfs:label field (thus supporting renaming).

Revision 20080 - Directory Listing
Modified Mon Sep 20 21:36:17 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding the LabellingClassTreePortlet, together with the server-side infrastructure (the createClsWithProperty methods) to make it work.

Revision 20078 - Directory Listing
Modified Mon Sep 20 20:38:10 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changed the ClassValueSet rdfs:labels from "en" to "".

Revision 20077 - Directory Listing
Modified Mon Sep 20 18:31:32 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing the rdfs:label property of the class value set.

Revision 20076 - Directory Listing
Modified Mon Sep 20 18:30:14 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding rdfs:labels to the subclasses of ClassValueSet.

Revision 20075 - Directory Listing
Modified Mon Sep 20 16:51:10 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing issue with inclusion term.

Revision 20058 - Directory Listing
Modified Fri Sep 17 16:55:33 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Disabled delete button on the Value Sets tab.

Revision 20057 - Directory Listing
Modified Fri Sep 17 16:54:42 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Now supports the delete_enabled configuration property.

Revision 20056 - Directory Listing
Modified Fri Sep 17 01:31:34 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing EventsRelatedTo*Event classes to EventRelatedTo*.

Revision 20055 - Directory Listing
Modified Fri Sep 17 00:51:48 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing text of replace existing value link.

Revision 20054 - Directory Listing
Modified Fri Sep 17 00:50:04 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Exposing variable to subclasses.

Revision 20053 - Directory Listing
Modified Fri Sep 17 00:48:21 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Standardizing all references to iCat PS from iCat ICPS and ICPSICat to iCatPS.

Revision 20052 - Directory Listing
Modified Fri Sep 17 00:41:10 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Renaming Category Notes and Discussions tab to Notes and Discussions.

Revision 20051 - Directory Listing
Modified Fri Sep 17 00:40:17 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Renaming Class Value Set tab to Value Set and moving it to the next-to-last position.

Revision 20049 - Directory Listing
Modified Thu Sep 16 21:28:23 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing problem with nutrition problem field.

Revision 20047 - Directory Listing
Modified Thu Sep 16 19:02:23 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Making the test for isReplace stronger; now uses the underlying array, rather than the count of the Records (which was returning 1 when it should have returned 0).

Revision 20046 - Directory Listing
Modified Thu Sep 16 19:01:37 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Cleaning up formatting of find and replace term.

Revision 20045 - Directory Listing
Modified Thu Sep 16 18:16:01 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing Reference Terms so that they subclass of ICPS Reference Term (were subclasses of only the who-fic ReferenceTerm). This means that they now inherit the properties we expect of them; things like ICPS label etc..

Revision 20044 - Directory Listing
Modified Thu Sep 16 16:00:59 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing issue with the infrastructure problem field.

Revision 20040 - Directory Listing
Modified Thu Sep 16 00:30:08 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Correcting the harm properties of the outcomes sections. Also creating new tabs for Injuries, disorders and diseases.

Revision 20039 - Directory Listing
Modified Wed Sep 15 23:30:26 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
allow multiple values now works correctly with the InstanceGridWidget - was relying on the initialization being called once per render, but this is called once to initialize the widget per configuration, not view. Fix was to build the rendering of find term/replace term into the GetTriplesHandler, so that we populate the correct combination of find term or replace term.

Revision 20037 - Directory Listing
Modified Wed Sep 15 21:38:04 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added switch so that mulitple selections when bioportal import screen is open works as expected when mlutiple selection is enabled.

Revision 20036 - Directory Listing
Modified Wed Sep 15 20:54:13 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding multiple_values_allowed flag to the functional properties fields that need it.

Revision 20035 - Directory Listing
Modified Wed Sep 15 20:20:42 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Refining multiple values behaviour.

Revision 20034 - Directory Listing
Modified Wed Sep 15 01:00:23 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Code now honours the allow_multiple_values flag. If this is set to true, then the InstanceGridWidget, the ReferenceFieldWidget and the ClassInstanceReferenceWidget will all behave appropriately.

Revision 20011 - Directory Listing
Modified Sat Sep 11 00:49:27 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Removing all mention of the web-protege-server.lib file. This has been rolled into the chao plugin.

Revision 20010 - Directory Listing
Modified Sat Sep 11 00:33:57 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing labels on the adverse reaction outcomes tab and on the disability outcome tab.

Revision 20009 - Directory Listing
Modified Sat Sep 11 00:31:51 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Entering first cut of third prototype, based on ST's new content model. This new content model has been checked in, together with a new configuration to make it work. 
* Now has a seperate Class Value Sets tab, which allows users to enhance value sets that are referenced by the internal class reference widget.
* Completed new Event Type section configuration, including service administration, transfusions, infrastructure etc as well as redoing falls and medication section.
* Added Manage Value Set Hierarchy tab, which allows users to move their value sets around in the hierarchy. 
* Also completed the configuration for the actions axis.
* Also completed the configuration for the outcome axis (nothing really to do for contextual factors).

Revision 20007 - Directory Listing
Modified Fri Sep 10 21:23:44 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added import as a result of moving the RetrieveChangesProtegeJob to the chao plugin.

Revision 19989 - Directory Listing
Modified Thu Sep 9 17:31:41 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding logging message on error.

Revision 19985 - Directory Listing
Modified Wed Sep 8 21:50:29 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding the WebProtegeServerPlugin jar to the war file.

Revision 19972 - Directory Listing
Modified Wed Sep 8 19:16:30 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Removing the threat of 'partial' changes being returned by the call to get ontology changes.

Revision 19945 - Directory Listing
Modified Tue Sep 7 19:13:14 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Making the Class Instance Reference Field Widget completely configurable.
* The ontology id is derived from the url
* Ontology id and concept id are now configurable in exactly the same way as the bioportal reference widget.

Revision 19935 - Directory Listing
Modified Fri Sep 3 22:19:48 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Removing older fix; this was no longer needed after Alex corrected the trailing slash issue.

Revision 19931 - Directory Listing
Modified Fri Sep 3 21:07:59 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding additional logging line.

Revision 19929 - Directory Listing
Modified Fri Sep 3 17:16:30 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Now compensates for the fact that server projects are not open when the server first starts up. We used to store the time of the last run against the metaproject, but we now store it against individual project instances, which means that each project knows the last time it was run. This is individually set, too, so that, if we start up and a project is not open, it's last run time will not be set.

Revision 19916 - Directory Listing
Modified Tue Aug 31 21:25:18 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Committing Tim's fix for the inclusions field.

Revision 19915 - Directory Listing
Modified Tue Aug 31 17:28:05 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing issue with preferred field. This was set to a textfield, but the ontology has this pegged as an object property. I changed the field to an instancetextfield, which allows creation/editing of the property using a widget that is essentially the same.

Revision 19914 - Directory Listing
Modified Tue Aug 31 16:15:13 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing the subject heading of the sent email to read "$application.name$ change report generated on ...".

Revision 19911 - Directory Listing
Modified Mon Aug 30 21:19:15 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Correcting previous fix.

Revision 19910 - Directory Listing
Modified Mon Aug 30 21:09:39 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Compensating for the additional slash that mod-jk and ajp occassionally throw us. This fixes open id when running through a proxy server.

Revision 19903 - Directory Listing
Modified Mon Aug 30 20:28:02 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Adding extra null guard.

Revision 19902 - Directory Listing
Modified Mon Aug 30 20:27:12 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Added logging of parameters.

Revision 19900 - Directory Listing
Modified Mon Aug 30 19:31:18 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Cleaning up exception logging in open id authentication response servlet.

Revision 19899 - Directory Listing
Modified Fri Aug 27 20:35:21 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixed bug with the event types not appearing multiple times. This was due to the term type PatientSafetyEventTerm not having a label property.

Revision 19898 - Directory Listing
Modified Fri Aug 27 19:22:59 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Making change to fix the failure of multiple entries to appear when adding to event type in the description references section of the description.

Revision 19897 - Directory Listing
Modified Fri Aug 27 17:18:37 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Synchronizing access to the set notifications method. This method has to be synchronized because clients call it concurrently - once for each type of notification (ontology and comment) to set - and protege is not multithreaded. This results in the occassional attempt to edit profile failing.

Revision 19894 - Directory Listing
Modified Fri Aug 27 17:02:07 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changing label at the request of TT.

Revision 19893 - Directory Listing
Modified Fri Aug 27 14:51:50 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixing bug that saw a blank window after using the close (x) button. This was due to the window not having it's close action set to hide, whereas cancel was set to hide.

Revision 19891 - Directory Listing
Modified Thu Aug 26 20:34:15 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Changes made at the request of TT:
 * Change text of email on sending comment to "username added a new comment"
 * Now directs users users to the notes tab when generating notes links. 
 * Changed link text from "jump to change" to "Direct link"

Revision 19890 - Directory Listing
Modified Thu Aug 26 18:38:38 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Allowing emails to be generated for an arbitrary application path. Previously assumed that the application would be deployed to root.

Revision 19889 - Directory Listing
Modified Thu Aug 26 17:52:29 2010 UTC (7 years, 1 month ago) by elliott
Original Path: web-protege
Fixed the null pointer exception being thrown when processing comment changes. We were using getInitialName of the Ontology_Component (which should be safer) but it is possible for this to be null, apparently. We now use current name, unless current name is null, in which case we fall back to using intial name.

Revision 19884 - Directory Listing
Modified Wed Aug 25 23:30:56 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixing compile error when compiled against Protege 3.4.3

Revision 19878 - Directory Listing
Modified Wed Aug 25 19:12:07 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding labels to reference terms that appear in drop-down boxes. These need labels (and to be language terms) because the front-end requires that they have browser text associated with them when deleting them.

Revision 19877 - Directory Listing
Modified Wed Aug 25 17:32:14 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Moving the event type tab to the description section and changing it to the Description References tab, at the request of Samson.

Revision 19876 - Directory Listing
Modified Wed Aug 25 16:58:20 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Moved the following properties from patientsafetyeventsection to patientsafetyeventdescriptionsection, at the request of Samson:
* harm
* action
* contextualFactors
* patientSafetyEvent

Revision 19875 - Directory Listing
Modified Wed Aug 25 16:42:38 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing text of label from Harm Type to Harm Reference as per Samson's request.

Revision 19874 - Directory Listing
Modified Wed Aug 25 15:30:52 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding iCat file so that we can change the title of the html page.

Revision 19865 - Directory Listing
Modified Wed Aug 25 01:18:30 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Correcting the medication section.

Revision 19861 - Directory Listing
Modified Tue Aug 24 22:07:43 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Internal references between classes now work, as HarmReference, ContextualFactorReference and ActionReference Terms all now work.

Revision 19855 - Directory Listing
Modified Mon Aug 23 23:03:08 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Description section value sets and structure added.

Revision 19854 - Directory Listing
Modified Mon Aug 23 23:02:41 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Now has expanded, improved Description section.

Revision 19837 - Directory Listing
Modified Mon Aug 23 17:10:13 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed names and title terms of the *Event Type classes. These were suffixed with Event Type, but are now, as per WHO's request, now Event.

Revision 19831 - Directory Listing
Modified Mon Aug 23 09:50:41 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
Updated Access Policy service

Revision 19830 - Directory Listing
Modified Sun Aug 22 19:07:02 2010 UTC (7 years, 2 months ago) by tredmond
Original Path: web-protege
standard svn:ignores

Revision 19829 - Directory Listing
Modified Sun Aug 22 15:35:34 2010 UTC (7 years, 2 months ago) by tredmond
Original Path: web-protege
standard svn:ignores

Revision 19822 - Directory Listing
Modified Sat Aug 21 01:45:57 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Committing latest cut of the ICPS project.
 * Patient Outcome sections now work
 * Description/Term/Linearization sections work

Revision 19820 - Directory Listing
Modified Fri Aug 20 23:26:26 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Class creation now works, added all action classes to the action metaclass

Revision 19819 - Directory Listing
Modified Fri Aug 20 20:53:47 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Cleaned up class names with a script

Revision 19818 - Directory Listing
Modified Fri Aug 20 18:27:14 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Correcting metaclass instances; everything is now an instance of the three base terms.

Revision 19817 - Directory Listing
Modified Fri Aug 20 15:44:16 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding first cut of Samson's content model.

Revision 19814 - Directory Listing
Modified Thu Aug 19 11:50:49 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
updated Ontology constants

Revision 19813 - Directory Listing
Modified Thu Aug 19 11:49:02 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
Updated Share access functionality. Updated functionality to display project with overridden policy to users with access rights.

Revision 19812 - Directory Listing
Modified Wed Aug 18 23:28:43 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing the second term that inclusions/exclusions boxes use. These were using a claml reference, which we have deleted in this ontology, thus the user was presented with a column that did not save properly.

Revision 19811 - Directory Listing
Modified Wed Aug 18 22:48:49 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing the property associated with the diagnostic criteria so that this property now works.

Revision 19810 - Directory Listing
Modified Wed Aug 18 18:56:08 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
The combobox will now remove it's contents correctly, as the property value associated with it is now correctly set to ValueType.Instance (was set to nothing, which defaults to ValueType.String, fine except that deletes will not occur properly).

Revision 19809 - Directory Listing
Modified Wed Aug 18 16:22:10 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Correcting typo in nature of occurrence display field.

Revision 19808 - Directory Listing
Modified Tue Aug 17 22:50:38 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Reverting previous change - the null guard was not, in the end, necessary.

Revision 19807 - Directory Listing
Modified Tue Aug 17 22:50:08 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Deleting instances and setting instances to an empty string now works as expected.

Revision 19806 - Directory Listing
Modified Tue Aug 17 21:26:27 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding null guard when returning setting new values. This was causing an NPE when setting the value of instancetextfieldwidgets to an empty string "" (effectively deleting them).

Revision 19805 - Directory Listing
Modified Tue Aug 17 00:31:54 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Corrected title term class.

Revision 19790 - Directory Listing
Modified Mon Aug 16 18:18:48 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Reverting the image location from image to /image

Revision 19789 - Directory Listing
Modified Mon Aug 16 18:07:02 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Reverting image path changes.

Revision 19788 - Directory Listing
Modified Mon Aug 16 17:56:27 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Moving reference root from /images/ to images/ for icons.

Revision 19787 - Directory Listing
Modified Mon Aug 16 17:46:29 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing location of the image files for the open id work.

Revision 19786 - Directory Listing
Modified Mon Aug 16 17:16:47 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing relative path of the bell image.

Revision 19779 - Directory Listing
Modified Sat Aug 14 17:06:44 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
updated code for Share access functionality. added functionality to override default policy for projects.

Revision 19778 - Directory Listing
Modified Sat Aug 14 00:46:16 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Commenting out action related properties for now.

Revision 19777 - Directory Listing
Modified Sat Aug 14 00:40:50 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding first cut of actions imported (by hand) from the conceptual framework.

Revision 19776 - Directory Listing
Modified Fri Aug 13 23:40:06 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Sorting out managing action/preventative action labels.

Revision 19773 - Directory Listing
Modified Fri Aug 13 21:11:21 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed the title field to use a plain old instance text field rather than the icd title text field.

Revision 19772 - Directory Listing
Modified Fri Aug 13 20:58:34 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Making changes to support the addition of classes by 'faking out' certain select parts of the ontology, so that the icd.jar classes work (because some limited number of classes/axioms are available so that it can create a title, title term etc when initializing the classes).

Revision 19770 - Directory Listing
Modified Fri Aug 13 16:24:29 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed tooltip to illustrate that the linearization section will not work until value sets are added.

Revision 19769 - Directory Listing
Modified Fri Aug 13 16:14:39 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Removed editorialStatus and subproperties from the content model.

Revision 19768 - Directory Listing
Modified Fri Aug 13 16:13:20 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixed temporal properties

Revision 19767 - Directory Listing
Modified Fri Aug 13 15:59:54 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Temporal properties now has the individuals set to the correct namespace.

Revision 19764 - Directory Listing
Modified Fri Aug 13 02:02:24 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changing the names of the tabs to be *Related Properties

Revision 19763 - Directory Listing
Modified Fri Aug 13 01:59:36 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
reordering the contents of the event properties tab.

Revision 19762 - Directory Listing
Modified Fri Aug 13 00:27:40 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Removing editorial status definition.

Revision 19761 - Directory Listing
Modified Fri Aug 13 00:23:29 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Removing type from linearization section.

Revision 19760 - Directory Listing
Modified Fri Aug 13 00:22:20 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Now allows the saving of signs and symptoms terms OK.

Revision 19759 - Directory Listing
Modified Thu Aug 12 23:26:25 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixed issues with the body part and body system importation of terms.

Revision 19758 - Directory Listing
Modified Thu Aug 12 22:51:56 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixed errors when changing discovery detection time and reporting time.

Revision 19757 - Directory Listing
Modified Thu Aug 12 22:49:04 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixing error on changing of the nature of ocurrence property.

Revision 19755 - Directory Listing
Modified Thu Aug 12 21:45:41 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Now displays only the label in the patient safety event - event properties tab. These did display both label and id, but id has been removed.

Revision 19754 - Directory Listing
Modified Thu Aug 12 19:52:48 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed description in forms tab to take the title as the display value, and changed the TitleTerm in the forms tab to take the label as the display value for that. Also added TitleTerms for all subclasses of ICPSCategory in the ontology.

Revision 19753 - Directory Listing
Modified Thu Aug 12 19:25:19 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed display property so that we render the classes as icpsTitle by default.

Revision 19752 - Directory Listing
Modified Thu Aug 12 18:36:26 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Cut image down a little and added white border.

Revision 19750 - Directory Listing
Modified Thu Aug 12 02:02:47 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
ICPS checkin. This includes a new widget to create terms from classes using a class tree selection mechanism.

Revision 19749 - Directory Listing
Modified Thu Aug 12 00:01:51 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Everything under event type now inherits from the definition, linear classification and term metaclasses.

Revision 19745 - Directory Listing
Modified Wed Aug 11 20:45:28 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
adding annotation project

Revision 19743 - Directory Listing
Modified Tue Aug 10 22:57:39 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Now correctly references the reference properties rather than classes directly.

Revision 19742 - Directory Listing
Modified Tue Aug 10 22:50:15 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding new reference terms and cleaning up some properties.

Revision 19740 - Directory Listing
Modified Tue Aug 10 20:38:32 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed the names of classes to all be Camel-case (some had underscores).

Revision 19739 - Directory Listing
Modified Tue Aug 10 16:08:36 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Changed namespace for biological sex individuals.

Revision 19738 - Directory Listing
Modified Tue Aug 10 15:26:32 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding extra null guard.

Revision 19737 - Directory Listing
Modified Tue Aug 10 01:10:13 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Polished up content model while implementing front-end.

Revision 19736 - Directory Listing
Modified Mon Aug 9 23:27:12 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Added many more classes as metaclass instances

Revision 19735 - Directory Listing
Modified Mon Aug 9 18:53:04 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding the first cut of the content model.

Revision 19726 - Directory Listing
Modified Fri Aug 6 10:49:54 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
added loggers temporarily to functions related to login(via encryption) and create new user functionality

Revision 19722 - Directory Listing
Modified Thu Aug 5 22:50:56 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
fixed the synchronization for getOpenServerProject and getOpenServerProjects

Revision 19721 - Directory Listing
Modified Thu Aug 5 06:14:00 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
Refactored name of AuthenticatinUtil.java to AuthenticationUtil.java

Revision 19699 - Directory Listing
Modified Mon Aug 2 21:06:57 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Removing error message altogether at the request of TT.

Revision 19689 - Directory Listing
Modified Mon Aug 2 19:41:20 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Now uses MessageBox.alert

Revision 19688 - Directory Listing
Modified Mon Aug 2 18:59:38 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Checking in test cases and code for the resolution of the Open Id links not appearing on the edit profile screen issue.

Revision 19687 - Directory Listing
Modified Mon Aug 2 18:51:27 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Enhanced build to run all client-side tests.

Revision 19686 - Directory Listing
Modified Mon Aug 2 17:44:31 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Fixed - bug on the edit profile screen with the Open Id links not appearing.

Revision 19685 - Directory Listing
Modified Mon Aug 2 13:34:21 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
Updated Share access functionality : 
1)Included functionality to display users from Groups other than projects own reader/writers group.
2)Also added functionality for not to allow updating of access for Groups other than project's reader/writers group.


Revision 19683 - Directory Listing
Modified Sat Jul 31 05:05:48 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
Jack will fix getting the properties

Revision 19682 - Directory Listing
Modified Sat Jul 31 04:46:55 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
formatting and imports

Revision 19681 - Directory Listing
Modified Sat Jul 31 04:45:12 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
removed comment

Revision 19680 - Directory Listing
Modified Sat Jul 31 04:44:47 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
added SUID
formatting

Revision 19679 - Directory Listing
Modified Sat Jul 31 04:44:30 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
minor. moved static block at beginning of class

Revision 19678 - Directory Listing
Modified Sat Jul 31 04:42:49 2010 UTC (7 years, 2 months ago) by tudorache
Original Path: web-protege
minor. renamed some methods and formatting

Revision 19676 - Directory Listing
Modified Sat Jul 31 02:31:04 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding infrastructure for client-side test cases, together with a sample client-side test case.

Revision 19648 - Directory Listing
Modified Thu Jul 29 15:51:50 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding junit libraries.

Revision 19647 - Directory Listing
Modified Thu Jul 29 15:32:09 2010 UTC (7 years, 2 months ago) by elliott
Original Path: web-protege
Adding first test case.

Revision 19635 - Directory Listing
Modified Tue Jul 27 13:00:08 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
updated web.xml

Revision 19634 - Directory Listing
Modified Tue Jul 27 12:59:21 2010 UTC (7 years, 2 months ago) by zeeshan
Original Path: web-protege
Updated Share access policy functionality.
Added Add Cancel button for updating changes or cancel changed for whole Share access window.
Updated GUI.
Added functionality to close share access window when user logouts.


Revision 19625 - Directory Listing
Modified Mon Jul 26 23:21:00 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
Fixed the rest of the code where getId() was replaced by note.getEntity().getName() to avoid other possible NullPointerException.

Revision 19624 - Directory Listing
Modified Mon Jul 26 22:05:27 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding comment.

Revision 19623 - Directory Listing
Modified Mon Jul 26 22:00:59 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added comments.

Revision 19622 - Directory Listing
Modified Mon Jul 26 21:56:02 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Completely changing the way that properties are handled from the client to the server. For the first time, properties are now replicated across to the client (filtered through an extra properties file, the blacklist.properties) and wind up cached on the client.

Revision 19621 - Directory Listing
Modified Mon Jul 26 20:58:03 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
war/logs directory should not contain any file.

Revision 19611 - Directory Listing
Modified Fri Jul 23 22:45:35 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
just change a little bit the twitter query that should be shown by default.

Revision 19610 - Directory Listing
Modified Fri Jul 23 10:27:11 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
Added image for add user and remove user for Share Access functionality.

Revision 19609 - Directory Listing
Modified Fri Jul 23 10:26:02 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
Updated Share Access Policy functionality. 

Revision 19576 - Directory Listing
Modified Wed Jul 21 02:31:07 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
- Changed content of Properties tab to show domain, range, , and comment instead of the AllProperites Protlet.
- Added extra tab for showcasing the integration of the Twitter feeds into WebProtege

Revision 19575 - Directory Listing
Modified Wed Jul 21 02:10:14 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
Added minor change to allow inclusion of twitter widget using iframe.

Revision 19569 - Directory Listing
Modified Mon Jul 19 02:26:31 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
synchronization comment

Revision 19568 - Directory Listing
Modified Sat Jul 17 02:22:09 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Fixing Francesco's bug. The fix is to invoke syncValue (in Javascript) before actually fetching the value.

Revision 19567 - Directory Listing
Modified Sat Jul 17 01:25:15 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Reverting to previous version - attempted fix failed on dev.

Revision 19566 - Directory Listing
Modified Sat Jul 17 01:18:40 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding attempted fix to right-click copy issue.

Revision 19565 - Directory Listing
Modified Fri Jul 16 22:53:26 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now uses the entities as the key to store values.

Revision 19564 - Directory Listing
Modified Fri Jul 16 22:30:59 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Renaming variable.

Revision 19563 - Directory Listing
Modified Fri Jul 16 21:47:33 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now uses id rather than path to identify which windows have already been opened.

Revision 19562 - Directory Listing
Modified Fri Jul 16 20:18:26 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now uses a set to determine if a note window has been added. If it has been, the new window is not opened. If a tree node path is in the set, the new window is not opened.

Revision 19561 - Directory Listing
Modified Fri Jul 16 20:07:39 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Downgraded the logging.

Revision 19560 - Directory Listing
Modified Fri Jul 16 19:55:22 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding null guard in case the CHAO is not present.

Revision 19559 - Directory Listing
Modified Fri Jul 16 19:23:29 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding new double click listener to the TreeNodeListenerAdapter. This clears up the problem with double-clicks spawning two windows.

Revision 19558 - Directory Listing
Modified Fri Jul 16 04:47:53 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
added watch icons in the menu

Revision 19557 - Directory Listing
Modified Fri Jul 16 03:41:23 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
removed unused field

Revision 19556 - Directory Listing
Modified Fri Jul 16 03:41:02 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
changed label for unset watch to remove watch

Revision 19554 - Directory Listing
Modified Thu Jul 15 23:38:42 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
Added help button and link for to the wiki page about OpenID to the login window.

Revision 19553 - Directory Listing
Modified Thu Jul 15 23:36:48 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
Changed the Help link for linearization to point to the iCAT linearization wiki page.

Revision 19531 - Directory Listing
Modified Thu Jul 15 21:21:33 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Making this code null-tolerant; it was failing to create replies.

Revision 19530 - Directory Listing
Modified Thu Jul 15 19:10:29 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for null pointer in the initialization of the cache

Revision 19529 - Directory Listing
Modified Thu Jul 15 16:57:31 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Making this code null-tolerant; it was failing to create new topics.

Revision 19528 - Directory Listing
Modified Thu Jul 15 15:50:13 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Removed references to comments and made them notes.

Revision 19526 - Directory Listing
Modified Thu Jul 15 13:33:34 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
Added Javadoc to interface of Services for Open Id

Revision 19525 - Directory Listing
Modified Thu Jul 15 08:10:19 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
improved the operation description text

Revision 19524 - Directory Listing
Modified Thu Jul 15 07:41:36 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
- Updated welcome message with news about notifications sent for watched entities
- Changed the visual hints for watched entities to icons.

Revision 19523 - Directory Listing
Modified Thu Jul 15 07:13:38 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
not used


Revision 19522 - Directory Listing
Modified Thu Jul 15 06:58:43 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
minor

Revision 19521 - Directory Listing
Modified Thu Jul 15 06:58:32 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
add types info in the entity at create - important for tree

Revision 19520 - Directory Listing
Modified Thu Jul 15 06:58:02 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for adjustTabs - don't show all tabs

Revision 19519 - Directory Listing
Modified Thu Jul 15 04:34:55 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for onSubclassesAdded - not sure it is complete

Revision 19518 - Directory Listing
Modified Thu Jul 15 03:23:39 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Making links work in iCat

Revision 19517 - Directory Listing
Modified Thu Jul 15 03:02:41 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
minor

Revision 19516 - Directory Listing
Modified Thu Jul 15 03:00:46 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fixed a typo in the init of the cache

Revision 19515 - Directory Listing
Modified Thu Jul 15 02:27:09 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
changed create new icd category: set morbidity - yes, mortality - no, biologicalSex -NA

Revision 19499 - Directory Listing
Modified Wed Jul 14 22:57:07 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
- Update "Specific Condition Properties" tab (add sex NA & use life-cycle sub-properties)
- Resized widgets for Chapter XX.


Revision 19497 - Directory Listing
Modified Wed Jul 14 21:06:52 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
adjusting text for disabling retire

Revision 19496 - Directory Listing
Modified Wed Jul 14 20:13:19 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
remove the applyTo string from the change description 

Revision 19495 - Directory Listing
Modified Wed Jul 14 20:12:47 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
added load mask

Revision 19494 - Directory Listing
Modified Wed Jul 14 20:04:50 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
removed sysout

Revision 19493 - Directory Listing
Modified Wed Jul 14 18:04:27 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix in addWatched methods to support also watched both

Revision 19492 - Directory Listing
Modified Wed Jul 14 17:58:27 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
getWatchedEntities returns now also the entities in the watched branches - can be very expensive and slow

Revision 19491 - Directory Listing
Modified Wed Jul 14 17:57:38 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
register user in session when associating openid with webprotege account

Revision 19490 - Directory Listing
Modified Wed Jul 14 17:56:59 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
better transaction name for move in hierarchy used in change tracking

Revision 19489 - Directory Listing
Modified Wed Jul 14 17:56:30 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
constant for page size for watched grid

Revision 19488 - Directory Listing
Modified Wed Jul 14 17:56:00 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
added constructor

Revision 19482 - Directory Listing
Modified Wed Jul 14 16:19:53 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fixed the duplication of add user menu

Revision 19481 - Directory Listing
Modified Wed Jul 14 16:18:21 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
disabled "Retire" function at the request of WHO

Revision 19480 - Directory Listing
Modified Wed Jul 14 16:09:27 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding new methods, together with the facility (for test cases only) to purge the cache.

Revision 19479 - Directory Listing
Modified Wed Jul 14 08:26:33 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
don't cache the last watched type if it is unwatch

Revision 19478 - Directory Listing
Modified Wed Jul 14 08:22:19 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
reduced the number of clicks to select a watched entity

Revision 19477 - Directory Listing
Modified Wed Jul 14 07:59:27 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
added comments for Jack in the code

Revision 19476 - Directory Listing
Modified Wed Jul 14 07:59:08 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
added comments for Jack in the code

Revision 19475 - Directory Listing
Modified Wed Jul 14 07:58:41 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
changed the watched code - new logic, new implementation

Revision 19454 - Directory Listing
Modified Tue Jul 13 19:33:14 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Changing the immediate start time to be 10 minutes by default.

Revision 19453 - Directory Listing
Modified Tue Jul 13 19:21:35 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added new sample properties to protege.properties.

Revision 19452 - Directory Listing
Modified Tue Jul 13 19:18:56 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Refactored so that the initial startup delays can be configured.

Revision 19451 - Directory Listing
Modified Tue Jul 13 19:00:41 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Bumped up delay so that the notification scheduler servlet does not cause blocks when it first starts up.

Revision 19450 - Directory Listing
Modified Tue Jul 13 18:58:16 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Moving annotation cache initialization to the annotation cache itself.

Revision 19449 - Directory Listing
Modified Tue Jul 13 18:16:23 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
New stats from July 13

Revision 19448 - Directory Listing
Modified Tue Jul 13 18:10:30 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
minor: renaming a field, adding some comments, typo

Revision 19447 - Directory Listing
Modified Tue Jul 13 17:23:19 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Fixed 'failed to logout' bug. Now executes the remote logout functionality from the client.

Revision 19446 - Directory Listing
Modified Tue Jul 13 15:47:22 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Moving lazy selection of classes (initiated when we use the links feature) to the createRoot method.

Revision 19445 - Directory Listing
Modified Tue Jul 13 07:32:36 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fixes for null pointer and others

Revision 19444 - Directory Listing
Modified Tue Jul 13 07:25:39 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
log message

Revision 19443 - Directory Listing
Modified Tue Jul 13 07:25:12 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
add user info in session in checkIfOpenIdInSessionForLogin

Revision 19442 - Directory Listing
Modified Tue Jul 13 07:24:39 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for adjustTabs in case newEntity is null

Revision 19441 - Directory Listing
Modified Tue Jul 13 07:22:40 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
minor

Revision 19440 - Directory Listing
Modified Tue Jul 13 07:22:24 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
imports

Revision 19439 - Directory Listing
Modified Tue Jul 13 04:09:16 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
using a real operation description for class create for ICD

Revision 19438 - Directory Listing
Modified Tue Jul 13 04:04:36 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now skips out of our notification early if neither watch has been set.

Revision 19437 - Directory Listing
Modified Tue Jul 13 04:00:53 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added further npe guard.

Revision 19436 - Directory Listing
Modified Tue Jul 13 03:58:06 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Introduced wait so that the CTP works with larger ontologies.

Revision 19435 - Directory Listing
Modified Tue Jul 13 02:00:46 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Reformatting the notification links.

Revision 19433 - Directory Listing
Modified Tue Jul 13 01:29:10 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now sends out a properly formatted email and also eliminates the addition of a port if the port is set to 80

Revision 19429 - Directory Listing
Modified Mon Jul 12 22:31:16 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now persists the last run time information.

Revision 19419 - Directory Listing
Modified Mon Jul 12 13:17:16 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
Refactored AccessPolicyUtil

Revision 19418 - Directory Listing
Modified Mon Jul 12 05:32:09 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
java 5

Revision 19411 - Directory Listing
Modified Sat Jul 10 04:40:51 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
just a comment to remember a piece of code that might cause performance issues with the domain ontology

Revision 19410 - Directory Listing
Modified Sat Jul 10 04:05:40 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for "wrong frame type": not all changes are applied to classes.
formatting

Revision 19409 - Directory Listing
Modified Fri Jul 9 22:32:14 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now no longer sets the watches/branch watches 'optimistically'. Instead, these are set when the call to add has been successful.

Revision 19407 - Directory Listing
Modified Fri Jul 9 16:53:53 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Refactored code to make it a _bit_ faster (uses sets instead of lists, intializes only for the current server project).

Revision 19406 - Directory Listing
Modified Fri Jul 9 11:58:59 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
updated web.xml added mapping for access policy service

Revision 19405 - Directory Listing
Modified Fri Jul 9 11:34:27 2010 UTC (7 years, 3 months ago) by zeeshan
Original Path: web-protege
Added Functionality to Share ontology and access privilege

Revision 19404 - Directory Listing
Modified Fri Jul 9 06:38:02 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fixed the generation of forms for different tabs for different types. made it much more conservative.

Revision 19398 - Directory Listing
Modified Fri Jul 9 00:01:31 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now opens the spawned window with an empty URL (was set to a dummy URL).

Revision 19397 - Directory Listing
Modified Thu Jul 8 23:22:58 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added pop-up detection. We now detect a pop-up blocker and notify the use if a pop detector is enabled.

Revision 19396 - Directory Listing
Modified Thu Jul 8 19:57:43 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Reverted change 19391. We are now going with Zeehan's code for this release.

Revision 19395 - Directory Listing
Modified Thu Jul 8 18:09:30 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now has correct behaviour when one type or the other of notification is not configured.

Revision 19394 - Directory Listing
Modified Thu Jul 8 15:24:44 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Removing calls to system.out.println.

Revision 19393 - Directory Listing
Modified Thu Jul 8 15:18:09 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Fixing bug - branch watches are now removed (together with entity watches) whenever the remove watches command is issued.

Revision 19392 - Directory Listing
Modified Thu Jul 8 02:50:00 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding the first cut of the watched entities cache.

Revision 19391 - Directory Listing
Modified Thu Jul 8 00:20:40 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now properly sends users to the right url when authenticating with Open Id. 
* Was just sending users to /openauthservlet and hackily generating these urls (assumed that we were always running as /webprotege/)
* Now uses the much better GWT.getModuleUrl call, which allows us to generate a relative path to the servlet we want to forward to.

Revision 19386 - Directory Listing
Modified Wed Jul 7 04:58:46 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
important bug fix: when creating an external causes subclass, the parent class would have the metaclasses changed to the regular disease metaclasses.

Revision 19384 - Directory Listing
Modified Wed Jul 7 01:27:57 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
null check

Revision 19383 - Directory Listing
Modified Tue Jul 6 23:20:13 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Removed erroneously added null guard, and adding null guard against not finding user in metaproject.

Revision 19382 - Directory Listing
Modified Tue Jul 6 23:10:42 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Adding NPE guard against null timestamps.

Revision 19381 - Directory Listing
Modified Tue Jul 6 22:06:47 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now checks to confirm if creation of users is enabled before allowing users to create a user through the open id mechanisms.

Revision 19371 - Directory Listing
Modified Sat Jul 3 01:09:55 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Refactored the watched state.
 * Watched state now appears to the user after they refresh.
 * The ability to remove a watch has been added to the client.
 * All new code 'optimistically' reflects changes, and will only change back to a previous state if it fails.


Revision 19368 - Directory Listing
Modified Fri Jul 2 23:06:00 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added ICD back into the metaproject. ICD is now reaccesible from the main project.

Revision 19365 - Directory Listing
Modified Fri Jul 2 17:05:30 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added NPE handling for the case of classes.

Revision 19364 - Directory Listing
Modified Fri Jul 2 16:44:20 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Added better handling for individuals.

Revision 19363 - Directory Listing
Modified Fri Jul 2 16:25:19 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now no longer sends out duplicate notifications if both a parent and a child have a branch watch that captures a notification.

Revision 19362 - Directory Listing
Modified Fri Jul 2 16:12:53 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Re-enabling the changes annotation cache.

Revision 19356 - Directory Listing
Modified Fri Jul 2 05:52:24 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fixed syntax from merging

Revision 19355 - Directory Listing
Modified Fri Jul 2 02:30:57 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Now uses current name, as initial name is not always populated.

Revision 19354 - Directory Listing
Modified Fri Jul 2 02:13:47 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
just a comment

Revision 19353 - Directory Listing
Modified Fri Jul 2 02:12:46 2010 UTC (7 years, 3 months ago) by tudorache
Original Path: web-protege
fix for initialization of chao

Revision 19351 - Directory Listing
Modified Fri Jul 2 00:38:15 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Reinstating notifications code.

Revision 19350 - Directory Listing
Modified Fri Jul 2 00:33:57 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Reinstating the caching of user data inside the session.

Revision 19349 - Directory Listing
Modified Fri Jul 2 00:06:14 2010 UTC (7 years, 3 months ago) by nyulas
Original Path: web-protege
- Increased external sign-in window size to better accommodate content of multiple provider (like Google, myVidoop, etc)
- bound the VeriSign logo to the VeriSign log-in page (instead of Yahoo's, as it was set up by mistake)

Revision 19347 - Directory Listing
Modified Wed Jun 30 22:05:53 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Merging from version 19184 to version 19345 from branch http://smi-protege.stanford.edu/repos/protege/web-protege/branches/who

Revision 19345 - Directory Listing
Modified Wed Jun 30 16:06:39 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Merging changes from the branch http://smi-protege.stanford.edu/repos/protege/web-protege/branches/optra/

Revision 19341 - Directory Listing
Modified Tue Jun 29 22:18:23 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Updating merge comments

Revision 19340 - Directory Listing
Modified Tue Jun 29 22:17:21 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Merging changes from  http://smi-protege.stanford.edu/repos/protege/web-protege/branches/who - revision 18899:19339

Revision 19339 - Directory Listing
Modified Tue Jun 29 19:00:38 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
rolling back commit 19335, backing out the merge between owl api 3 and WHO branches

Revision 19338 - Directory Listing
Modified Tue Jun 29 17:38:12 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Updating merge comments

Revision 19337 - Directory Listing
Modified Tue Jun 29 17:37:05 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Merging revisions 18837:18898 from http://smi-protege.stanford.edu/repos/protege/web-protege/branches/who.

Revision 19335 - Directory Listing
Modified Tue Jun 29 17:05:17 2010 UTC (7 years, 3 months ago) by elliott
Original Path: web-protege
Merging changes from the branch http://smi-protege.stanford.edu/repos/protege/web-protege/branches/owlapi3/

Revision 19302 - Directory Listing
Modified Fri Jun 25 22:08:41 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding owlapi jar. 



Revision 19301 - Directory Listing
Modified Fri Jun 25 21:31:56 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
adding base iml file

Revision 19300 - Directory Listing
Modified Fri Jun 25 21:15:57 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
updating idea files

Revision 19298 - Directory Listing
Modified Fri Jun 25 16:47:49 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Optimizing imports for single file.

Revision 19296 - Directory Listing
Modified Fri Jun 25 08:42:17 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Twitter.html added

Revision 19295 - Directory Listing
Modified Fri Jun 25 08:41:46 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Special configuration for semtech user built for the SemTech demo. The Twitter widget included does not work on localhost tests.

Revision 19294 - Directory Listing
Modified Fri Jun 25 08:38:00 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Special configuration for Wines (non-collaborative project) and Collaborative Newspaper (Frames project) slightly modified from default configuration.xml

Revision 19293 - Directory Listing
Modified Fri Jun 25 07:55:16 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Replaced all NotesPortlet with NotesTreePortlet and set dimension to look reasonably well.

Revision 19292 - Directory Listing
Modified Fri Jun 25 07:24:35 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Added Window close listener to "Change Passoword","Create New User to associate OpenId" "Authenticate User to associate OpenId" Functionalities.

Revision 19291 - Directory Listing
Modified Fri Jun 25 06:26:05 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Replaced all NotesPortlet with NotesTreePortlet and set dimension to look reasonably well.

Revision 19290 - Directory Listing
Modified Fri Jun 25 00:46:27 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding the AEO ontology, together with specialized support code.

Revision 19282 - Directory Listing
Modified Thu Jun 24 02:18:49 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Taking a new branch for the demo at SemTech


Revision 19281 - Directory Listing
Modified Thu Jun 24 02:00:01 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding metaproject containing the ICD project configured.

Revision 19278 - Directory Listing
Modified Thu Jun 24 01:19:06 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Correction to previous commit; subclasses should appear underneath their parents straight away.

Revision 19277 - Directory Listing
Modified Thu Jun 24 01:13:01 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Acitvating the first cut of the class listening. This means that when classes are created, they should show straight up on the class portlet.

Revision 19270 - Directory Listing
Modified Wed Jun 23 18:59:48 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding new portlet and changes to the property value util to make the editing of annotations work.

Revision 19269 - Directory Listing
Modified Wed Jun 23 18:58:35 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Correcting problems with components that do not initialize properly. This happens because they expect createComponent to be invoked in the workflow before the component is used, but createComponent is not invoked until later. All the initialization logic has been moved to constructors.

Revision 19267 - Directory Listing
Modified Wed Jun 23 17:17:58 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Compensating for properties that use the ~# encoding for language. Regardless of whether they do or not, the editing should now just work.

Revision 19265 - Directory Listing
Modified Wed Jun 23 13:07:50 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated Create User functionality

Revision 19264 - Directory Listing
Modified Wed Jun 23 02:19:23 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Second cut of the object properties. This now works on ICD adding the description comments.

Revision 19263 - Directory Listing
Modified Tue Jun 22 22:22:19 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Now uses the correct version of the pizza and icd ontologies for testing.

Revision 19262 - Directory Listing
Modified Tue Jun 22 22:13:56 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Object properties now work in the front end (they are visible, at least).

Revision 19258 - Directory Listing
Modified Tue Jun 22 16:24:48 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Correcting hardcoded path.

Revision 19252 - Directory Listing
Modified Tue Jun 22 09:52:38 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated functionality to notify whether user already exists when creating new user to associate OpenId

Revision 19247 - Directory Listing
Modified Mon Jun 21 18:03:09 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Committing literal dataproperties, with functioning language tags. This has been done in a way such that the protege 3.4.4 code should continue to work in exactly the same way.

Revision 19235 - Directory Listing
Modified Fri Jun 18 23:42:07 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
First cut of the properties functionality. Annotations, and some parts of data properties can be created/deleted/updated by the front-end and will be reflected in owl 3!

Revision 19218 - Directory Listing
Modified Fri Jun 18 10:43:05 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated Following functionality to run on either encryption or SSL :
1)Change Password 
2)Login to associate OpenId
3)Create new user to associate OpenId

Also updated related GUI functionality and flow

Revision 19199 - Directory Listing
Modified Thu Jun 17 08:34:53 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fixed the paths of some of the implementations:
use the common impl with P3 for some servlets

Revision 19198 - Directory Listing
Modified Thu Jun 17 08:34:15 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added an owl file in the metaproject to be used by the owl-api backend

Revision 19197 - Directory Listing
Modified Thu Jun 17 08:33:42 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
formatting

Revision 19196 - Directory Listing
Modified Thu Jun 17 08:33:13 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
re-done initialization of projects - moved to the owl api project manager
imports
renamed some fields
moved other fields to OWLAPI manager


Revision 19195 - Directory Listing
Modified Thu Jun 17 08:32:12 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed services that should be common to the P3 implementation

Revision 19194 - Directory Listing
Modified Thu Jun 17 08:31:47 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
disabled the event manager - no events are sent to the client as a temp fix for the owl-api. TO BE FIXED VERY SOON!

Revision 19193 - Directory Listing
Modified Thu Jun 17 08:31:14 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored a lot of methods in the abstract class

Revision 19192 - Directory Listing
Modified Thu Jun 17 08:30:49 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added the owl api project manager

Revision 19191 - Directory Listing
Modified Thu Jun 17 08:30:29 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
the owl api project manager used to manage owlapi projects

Revision 19190 - Directory Listing
Modified Thu Jun 17 08:30:05 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
commented out the previous initialization - tests may not run. to be fixed

Revision 19189 - Directory Listing
Modified Thu Jun 17 08:29:39 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added some temp fix for null kb - to be revisited later

Revision 19188 - Directory Listing
Modified Thu Jun 17 08:28:55 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added the OWLAPIProjectManager - not really needed now

Revision 19187 - Directory Listing
Modified Thu Jun 17 08:28:36 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
moved some of the functionality here

Revision 19186 - Directory Listing
Modified Thu Jun 17 07:01:23 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
sync with WHO branch revision 19814

Revision 19184 - Directory Listing
Modified Thu Jun 17 06:43:32 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added the war.name - important

Revision 19183 - Directory Listing
Modified Thu Jun 17 06:42:33 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
made it generic for the project

Revision 19182 - Directory Listing
Modified Thu Jun 17 06:42:15 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
minor

Revision 19181 - Directory Listing
Modified Thu Jun 17 06:41:59 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19180 - Directory Listing
Modified Thu Jun 17 06:41:35 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19179 - Directory Listing
Modified Thu Jun 17 06:41:17 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
factory class for project managers

Revision 19178 - Directory Listing
Modified Thu Jun 17 06:40:59 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager
ProjectManager is now an interface

Revision 19177 - Directory Listing
Modified Thu Jun 17 06:40:36 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager
- minor style

Revision 19176 - Directory Listing
Modified Thu Jun 17 06:40:17 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager
- minor style

Revision 19175 - Directory Listing
Modified Thu Jun 17 06:40:00 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager
- minor style

Revision 19174 - Directory Listing
Modified Thu Jun 17 06:39:36 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19173 - Directory Listing
Modified Thu Jun 17 06:39:19 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
use now the ProjectManagerFactory and register ProjectManagers
minor rearrangement of code

Revision 19172 - Directory Listing
Modified Thu Jun 17 06:38:34 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19171 - Directory Listing
Modified Thu Jun 17 06:38:23 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19170 - Directory Listing
Modified Thu Jun 17 06:37:41 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
- removed the ICD Statistics methods
- refactored ProjectManager -> Protege3ProjectManager

Revision 19169 - Directory Listing
Modified Thu Jun 17 06:37:01 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
refactored ProjectManager -> Protege3ProjectManager

Revision 19168 - Directory Listing
Modified Thu Jun 17 06:29:47 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
to be used in future

Revision 19167 - Directory Listing
Modified Thu Jun 17 06:29:28 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed the ICD Statistics tab and portlet

Revision 19166 - Directory Listing
Modified Thu Jun 17 06:29:16 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed the ICD Statistics tab and portlet

Revision 19165 - Directory Listing
Modified Thu Jun 17 06:28:59 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed the ICD Statistics data

Revision 19164 - Directory Listing
Modified Thu Jun 17 06:28:40 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
- removed the ICD statistics methods
- reordered some of the other methods

Revision 19163 - Directory Listing
Modified Thu Jun 17 06:28:03 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
some more settings

Revision 19162 - Directory Listing
Modified Thu Jun 17 00:25:12 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
adding idea configuration files

Revision 19161 - Directory Listing
Modified Thu Jun 17 00:17:47 2010 UTC (7 years, 4 months ago) by nyulas
Original Path: web-protege
Deleted some residue code from the old ChAO-based notes handling that.

Revision 19155 - Directory Listing
Modified Wed Jun 16 21:28:51 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Merging refactor of the MetaProjects over from the WHO branch.

Revision 19154 - Directory Listing
Modified Wed Jun 16 21:23:41 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Refactored meta project managers, which now share code.

Revision 19151 - Directory Listing
Modified Wed Jun 16 18:35:14 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Reverting to previous version to correct merged xml issue.

Revision 19140 - Directory Listing
Modified Wed Jun 16 00:07:22 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
adding temporarily the change.owl used by the Notes-API. Should be moved in a better location. Maybe include it into the notes-api.jar?

Revision 19139 - Directory Listing
Modified Wed Jun 16 00:00:29 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Bubbling up new methods to remove GWT exception; it seems that if a public method is available on the GWT synchronous interface, it must also appear on the asynch interface, or GWT will complain at runtime.

Revision 19138 - Directory Listing
Modified Tue Jun 15 23:58:44 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Reverting to previous version and removing duplicate Admin servlet definition.

Revision 19137 - Directory Listing
Modified Tue Jun 15 23:01:08 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding more read/write functionality to the OntologyServiceImpl class, together with the support test cases.

Revision 19128 - Directory Listing
Modified Sat Jun 12 00:04:35 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
made changes to use both notes and db as backends.

Revision 19127 - Directory Listing
Modified Sat Jun 12 00:02:12 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
notes manager now uses a file backend

Revision 19126 - Directory Listing
Modified Fri Jun 11 22:12:02 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added the notes-api.jar 
source code in GForge

Revision 19125 - Directory Listing
Modified Fri Jun 11 21:33:20 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
Bug fix: returning empty list instead of "null" in getNotes()

Revision 19124 - Directory Listing
Modified Fri Jun 11 20:43:32 2010 UTC (7 years, 4 months ago) by dilvan
Original Path: web-protege
Sync with protege api (v 3.0.0) to be compatible with Protege 4.1.2. Also added core write functions.

Revision 19123 - Directory Listing
Modified Fri Jun 11 18:02:44 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Removing classes that seem to be inadvertantly checked in.

Revision 19119 - Directory Listing
Modified Fri Jun 11 16:07:46 2010 UTC (7 years, 4 months ago) by dilvan
Original Path: web-protege
Sync with protege api (v 3.0.0) to be compatible with Protege 4.1.2. Also added core write functions.

Revision 19118 - Directory Listing
Modified Fri Jun 11 14:55:56 2010 UTC (7 years, 4 months ago) by dilvan
Original Path: web-protege
Sync with protege api (v 3.0.0) to be compatible with Protege 4.1.2. Also added core write functions.

Revision 19117 - Directory Listing
Modified Fri Jun 11 14:55:04 2010 UTC (7 years, 4 months ago) by dilvan
Original Path: web-protege
Sync with protege api (v 3.0.0) to be compatible with Protege 4.1.2. Also added core write functions.

Revision 19114 - Directory Listing
Modified Thu Jun 10 22:41:42 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
commenting out saveTransaction()

Revision 19113 - Directory Listing
Modified Thu Jun 10 22:40:14 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
notes manager returns for db

Revision 19111 - Directory Listing
Modified Thu Jun 10 18:08:29 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fixed compilation errors

Revision 19110 - Directory Listing
Modified Thu Jun 10 18:08:00 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fixed compilation errors.. missing imports

Revision 19109 - Directory Listing
Modified Thu Jun 10 18:07:39 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fixed comiplation errors.. missing imports

Revision 19102 - Directory Listing
Modified Thu Jun 10 01:40:13 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
compilation error fixes

Revision 19101 - Directory Listing
Modified Thu Jun 10 00:22:57 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
migration to the Notes API

Revision 19100 - Directory Listing
Modified Thu Jun 10 00:22:43 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
migration to the Notes API

Revision 19099 - Directory Listing
Modified Thu Jun 10 00:17:41 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
using the NotesAPI implementation for the ChaoServiceImpl

Revision 19098 - Directory Listing
Modified Thu Jun 10 00:15:15 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
synch with WHO branch rev. 19093

Revision 19097 - Directory Listing
Modified Thu Jun 10 00:13:48 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
synch with WHO branch rev. 19093

Revision 19096 - Directory Listing
Modified Thu Jun 10 00:13:31 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
synch with WHO branch rev. 19093

Revision 19095 - Directory Listing
Modified Thu Jun 10 00:13:19 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
synch with WHO branch rev. 19093

Revision 19094 - Directory Listing
Modified Thu Jun 10 00:09:30 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
migration to the Notes API

Revision 19092 - Directory Listing
Modified Wed Jun 9 23:51:46 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fixed compilation errors: getId was removed from NotesData

Revision 19091 - Directory Listing
Modified Wed Jun 9 23:48:11 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
Removing NotesData getId() and replacing it with getEntity().getName()

Revision 19090 - Directory Listing
Modified Wed Jun 9 23:47:39 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
Removing NotesData getId() and replacing it with getEntity().getName()

Revision 19089 - Directory Listing
Modified Wed Jun 9 23:47:28 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
Removing NotesData getId() and replacing it with getEntity().getName()

Revision 19088 - Directory Listing
Modified Wed Jun 9 23:47:18 2010 UTC (7 years, 4 months ago) by kasturi
Original Path: web-protege
Removing NotesData getId() and replacing it with getEntity().getName()

Revision 19087 - Directory Listing
Modified Wed Jun 9 13:09:55 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated Server polling functionality.

Revision 19072 - Directory Listing
Modified Tue Jun 8 13:36:20 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Added property for "session timeout" minutes.  
Added functionality to stop polling the server when user closes the Popup window.

Revision 19038 - Directory Listing
Modified Fri Jun 4 01:05:41 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added ChangeSummaryPortlet in getAvailablePortletNames

Revision 19037 - Directory Listing
Modified Fri Jun 4 01:04:58 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed warning message; should be fine now with the paging

Revision 19036 - Directory Listing
Modified Fri Jun 4 01:04:13 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fix for getOpenServerProjects - return a copy rather than the actual list

Revision 19035 - Directory Listing
Modified Fri Jun 4 01:03:27 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed comment

Revision 19034 - Directory Listing
Modified Fri Jun 4 01:02:09 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fix for saveAllprojects: - save also the domain projects (before we would only save the annotation projects..); fix for null pointer in the case that save was invoked before the domain project was loaded.

Revision 19033 - Directory Listing
Modified Fri Jun 4 01:00:46 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
removed unused code

Revision 19032 - Directory Listing
Modified Fri Jun 4 01:00:03 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
fix for getProjectsData. if user is not logged in, then use the "Guest" account

Revision 19030 - Directory Listing
Modified Thu Jun 3 21:40:17 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Added property to enable/disable notification to users.

Revision 19029 - Directory Listing
Modified Thu Jun 3 21:20:00 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Added branch watching to the codebase. This means that users can now register to be notified of changes that happen _to a branch_.

Revision 19019 - Directory Listing
Modified Thu Jun 3 11:16:16 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Refactored code

Revision 19018 - Directory Listing
Modified Thu Jun 3 11:03:18 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Refactored Code.

Revision 19011 - Directory Listing
Modified Wed Jun 2 00:56:12 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
deleted DateUtil class, use now getDateParsed method from DefaultTimestamp

Revision 19010 - Directory Listing
Modified Wed Jun 2 00:55:56 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
deleted DateUtil class, use now getDateParsed method from DefaultTimestamp

Revision 18999 - Directory Listing
Modified Wed Jun 2 00:04:46 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Cleaning up username/properties.

Revision 18997 - Directory Listing
Modified Tue Jun 1 12:55:42 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Refactored code: Removed unused methods

Revision 18995 - Directory Listing
Modified Mon May 31 13:13:59 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Added property application.https.port in protege.properties. Feature allows the webserver to serve https on any port.

Revision 18979 - Directory Listing
Modified Fri May 28 22:26:48 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Removing configuration parameter from NotificationSchedulerServlet.

Revision 18978 - Directory Listing
Modified Fri May 28 22:25:11 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
First check in of the notifications/alert framework. Check-in includes:
 * First cut of the edit profile GUI to enable hourly/daily etc notification of comment or ontology changes.
 * System property to enable the enabling/disabling of immediate notification.
 * Caching of annotation changes.
 * Server side threads (implemented in servlet) to gather all eligible changes and batch them by user.
 * Functionality to email these changes in a single mail, together with links pointing back to the changes on the server.

Revision 18977 - Directory Listing
Modified Fri May 28 19:00:19 2010 UTC (7 years, 4 months ago) by tudorache
Original Path: web-protege
added project name to ServerProject

Revision 18976 - Directory Listing
Modified Fri May 28 12:34:45 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated OpenId Functionality and GUI.

Revision 18975 - Directory Listing
Modified Fri May 28 04:16:40 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Removed alert

Revision 18974 - Directory Listing
Modified Thu May 27 15:26:30 2010 UTC (7 years, 4 months ago) by elliott
Original Path: web-protege
Adding the name of the authentication module into the template file.

Revision 18973 - Directory Listing
Modified Thu May 27 13:25:56 2010 UTC (7 years, 4 months ago) by zeeshan
Original Path: web-protege
Updated OpenId functionality: OpenId login now independent of the Web-Server port
Added target in build.xml to compile Authentication module.

Revision 18966 - Directory Listing
Modified Wed May 26 22:35:27 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed system.outs

Revision 18965 - Directory Listing
Modified Wed May 26 22:34:15 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed a system.out

Revision 18963 - Directory Listing
Modified Wed May 26 13:34:27 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added background color to Authentication window to match login window color.

Revision 18962 - Directory Listing
Modified Wed May 26 13:33:26 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated code to login with OpenId initially with http window , when login.with.https is false
Added feature to dynamically resize the https login window size


Revision 18956 - Directory Listing
Modified Wed May 26 01:12:05 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
added link to the survey in the Welcome message

Revision 18955 - Directory Listing
Modified Wed May 26 00:49:35 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added placeholder for risk factors + minor formattings

Revision 18953 - Directory Listing
Modified Wed May 26 00:17:14 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Extracted common BioPortal reference widget configurations in global (i.e. project level) configurations and modified ReferenceFieldWidget to be able to correctly read such configuration files.

Revision 18949 - Directory Listing
Modified Tue May 25 22:43:58 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Setting the authenticate servlet to serve from webprotege/authenticate/authenticate/authen - was serving from webprotege/authenticate/authen, which the client did not expect.

Revision 18947 - Directory Listing
Modified Tue May 25 13:34:11 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated protege.properties: Added property login.with.https

Revision 18946 - Directory Listing
Modified Tue May 25 13:32:23 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added feature to login with both encryption and https.
Updated Open Id login feature.

Revision 18945 - Directory Listing
Modified Tue May 25 04:18:08 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
increased height of Formula and Herbs properties in Treatment tab

Revision 18944 - Directory Listing
Modified Tue May 25 04:17:40 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
minor change

Revision 18943 - Directory Listing
Modified Tue May 25 04:16:03 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
minor change

Revision 18942 - Directory Listing
Modified Tue May 25 03:58:25 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
several changes from prod

Revision 18941 - Directory Listing
Modified Tue May 25 03:58:19 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
several changes from prod

Revision 18940 - Directory Listing
Modified Tue May 25 03:58:17 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
An attempt to make welcome message multilingual.

Revision 18939 - Directory Listing
Modified Tue May 25 03:58:13 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
several changes from prod

Revision 18938 - Directory Listing
Modified Tue May 25 03:43:39 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
several changes from prod

Revision 18937 - Directory Listing
Modified Tue May 25 03:43:29 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
several changes from prod

Revision 18936 - Directory Listing
Modified Tue May 25 03:14:44 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Changed ICD to ICTM everywhere in the UI, including rephrasing the welcome message.

Revision 18935 - Directory Listing
Modified Tue May 25 02:40:47 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Important! Fixed ICTM property names used in instance checkbox widgets.
+ Changed ICD to ICTM in 2 labels

Revision 18934 - Directory Listing
Modified Tue May 25 01:53:22 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added placeholder text for statistics.

Revision 18933 - Directory Listing
Modified Tue May 25 01:14:35 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Integrated Samson's corrections in the ICTM content model addressing missing and wrongly named instances/properties

Revision 18930 - Directory Listing
Modified Mon May 24 19:36:38 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed Causal Properties tab, and all the BioPortal reference widget configurations.

Revision 18923 - Directory Listing
Modified Mon May 24 09:55:08 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
ICTM configuration follows in great detail the UI mock-up

Revision 18922 - Directory Listing
Modified Mon May 24 05:58:45 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
First try on the ICTM configuration

Revision 18921 - Directory Listing
Modified Sat May 22 00:48:05 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Changes to DateUtil to handle different locales

Revision 18920 - Directory Listing
Modified Sat May 22 00:46:47 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Changed ICD configuration based on preliminary WHO feedback:
- changed tab title "Type & Use" to "Classification Properties"
- changed label "Morphologically Abnormal Structure" to "Histopathology"
- Extracted Diagnostic Criteria widget in its own tab
- changed label "Investigations" to "Investigation Findings"

Revision 18918 - Directory Listing
Modified Fri May 21 12:41:07 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
updated web.xml

Revision 18917 - Directory Listing
Modified Fri May 21 12:40:29 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated functionality of “Add new Open Id” and “Change Password” to work through https. 

Revision 18916 - Directory Listing
Modified Thu May 20 23:01:29 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Fixed paths of projects.

Revision 18915 - Directory Listing
Modified Thu May 20 22:16:17 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
use same collab projects as protege 3.4.4

Revision 18914 - Directory Listing
Modified Thu May 20 21:16:42 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Adding security constraint to prevent the service of protege.properties and removing the trial file in web.xml.extra.

Revision 18913 - Directory Listing
Modified Wed May 19 23:03:07 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Replaced statistics.html with newly generated stats.html that has the CSS file aved separately in stats.css

Revision 18910 - Directory Listing
Modified Wed May 19 04:57:55 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
initially add the tabbed form with no tabs enabled

Revision 18909 - Directory Listing
Modified Wed May 19 01:17:29 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
added NotesTree.css to iCat.html also.

Revision 18908 - Directory Listing
Modified Wed May 19 00:38:08 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Now properly purges the session on logout. The session token is removed from the httpsession when clicking on the logout link by a new server-side method.

Revision 18907 - Directory Listing
Modified Tue May 18 23:53:31 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Fixing null pointer.

Revision 18906 - Directory Listing
Modified Tue May 18 22:27:28 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed tab selection problem when user changes selected entity (e.g. selects a different class in the class tree portlet) to something that does not show the currently selected tab.

Revision 18905 - Directory Listing
Modified Tue May 18 22:20:22 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
getEntity returns the types too

Revision 18904 - Directory Listing
Modified Tue May 18 21:38:36 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Updating the merge-status after porting functionality to WHO branch.

Revision 18903 - Directory Listing
Modified Tue May 18 21:35:19 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Moving changes across from the optra branch. To support the link functionality, I've had to remove the dual calls to notify listeners in this class. If left in, when using the links on the individuals tab, we will fetch every individual twice.


Revision 18902 - Directory Listing
Modified Tue May 18 21:35:00 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Moving changes across from the optra branch. Adding the first cut of the 'link' functionality. This opens an ontology, then a tab, then selects and item when the url query of type &ontology=MyOnt&tab=IndividualsTab&idhttp://www.co-ode.org/ontologies/pizza/2005/10/18/pizza.owl#France is present.


Revision 18901 - Directory Listing
Modified Tue May 18 21:09:08 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Now no longer logs out a user on page refresh. In fact, the user is logged out, but immediately an event is triggered to log the user back in.

Revision 18900 - Directory Listing
Modified Tue May 18 19:17:59 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
To support the link functionality, I've had to remove the dual calls to notify listeners in this class. If left in, when using the links on the individuals tab, we will fetch every individual twice.

Revision 18899 - Directory Listing
Modified Tue May 18 19:16:31 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Adding the first cut of the 'link' functionality. This opens an ontology, then a tab, then selects and item when the url query of type &ontology=MyOnt&tab=IndividualsTab&idhttp://www.co-ode.org/ontologies/pizza/2005/10/18/pizza.owl#France is present.

Revision 18898 - Directory Listing
Modified Tue May 18 19:14:57 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added html message portlet to display the statistics of top 10 most active categories

Revision 18897 - Directory Listing
Modified Tue May 18 10:20:00 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
updated LoginUtil

Revision 18896 - Directory Listing
Modified Tue May 18 09:32:28 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated LoginUtil.java

Revision 18895 - Directory Listing
Modified Tue May 18 08:52:13 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
deleted loading gif from images

Revision 18894 - Directory Listing
Modified Tue May 18 07:32:00 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added functionality for signing through https .

Revision 18893 - Directory Listing
Modified Tue May 18 07:02:10 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Updated to match the fixed content model.

Revision 18892 - Directory Listing
Modified Mon May 17 19:06:21 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
synched to rev 18891 of WHO branch

Revision 18891 - Directory Listing
Modified Mon May 17 19:02:58 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
synced server packcahe to rev 18837 from WHO branch

Revision 18890 - Directory Listing
Modified Mon May 17 02:15:48 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Set default search strings to retrieve all possible values for external cause properties: intent, activity, etc. except for "details for activity" because it includes the codes O1-O2 and S1-S2 that has no common characters to be used as search string. 

Revision 18884 - Directory Listing
Modified Sat May 15 06:20:23 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Moved the "SNOMED References" tab and the "ICD 10 Notes and Hints" tab to the end of the list, so that it gets rendered properly also for Chapter XX (Ext.Causes and Inj.)

Revision 18883 - Directory Listing
Modified Sat May 15 05:47:35 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Improved Functional Impact tab configuration:
- to show separators
- to show nicer labels
- to allow enough space for all checkboxes, also in FF on Ubuntu
- to set default search string for each "other" property so that it returns all possible values

Revision 18882 - Directory Listing
Modified Fri May 14 23:41:39 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added 2px margin for tab headers

Revision 18881 - Directory Listing
Modified Fri May 14 07:05:08 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed an exception that occurs in IE. Reduced reserved width for vertical scroll bar.

Revision 18880 - Directory Listing
Modified Fri May 14 05:23:34 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
added expand and collapse all functionality

Revision 18879 - Directory Listing
Modified Fri May 14 05:23:21 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
added expand and collapse all functionality

Revision 18878 - Directory Listing
Modified Fri May 14 05:23:11 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
added expand and collapse all functionality

Revision 18877 - Directory Listing
Modified Fri May 14 05:23:02 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
added expand and collapse all functionality

Revision 18876 - Directory Listing
Modified Fri May 14 01:58:07 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
updated styling for NotesTreePortlet

Revision 18875 - Directory Listing
Modified Fri May 14 01:57:42 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
removed a comment

Revision 18874 - Directory Listing
Modified Fri May 14 01:57:22 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes for browser resize()

Revision 18873 - Directory Listing
Modified Fri May 14 01:57:14 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes for browser resize()

Revision 18872 - Directory Listing
Modified Fri May 14 01:29:07 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
set title in a different way

Revision 18871 - Directory Listing
Modified Fri May 14 01:20:42 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
using an attribute to figure out if the tab is visible or not; isVisible did not work

Revision 18870 - Directory Listing
Modified Fri May 14 01:20:12 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added some methods

Revision 18869 - Directory Listing
Modified Fri May 14 01:15:53 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
changed types_any property for the "SNOMED References" and the "ICD10 Notes and Hints" tabs

Revision 18868 - Directory Listing
Modified Fri May 14 00:50:39 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added Extenal causes specific tabs to the main iCAT configuration file

Revision 18867 - Directory Listing
Modified Fri May 14 00:23:35 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Configured properly the Functional Properties tab AND added types_any configuration to each tab.

Revision 18866 - Directory Listing
Modified Thu May 13 23:43:36 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added configuration for Functional Properties

Revision 18865 - Directory Listing
Modified Thu May 13 23:35:19 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added any types for title & def - just an example, it is not correct

Revision 18864 - Directory Listing
Modified Thu May 13 23:34:53 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added css for tabpanel in single for multiple rows

Revision 18863 - Directory Listing
Modified Thu May 13 23:34:34 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
getSubclasses now adds also the types of the classes... needed in icat for form config..

Revision 18862 - Directory Listing
Modified Thu May 13 23:33:51 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
not needed

Revision 18861 - Directory Listing
Modified Thu May 13 23:33:43 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
new logic for adjusting the config based on the types of the entity
implemented reload()

Revision 18860 - Directory Listing
Modified Thu May 13 23:33:11 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed @override

Revision 18859 - Directory Listing
Modified Thu May 13 23:32:47 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
new logic for different types and config

Revision 18858 - Directory Listing
Modified Thu May 13 23:32:25 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added types any

Revision 18857 - Directory Listing
Modified Thu May 13 23:32:16 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added refresh

Revision 18856 - Directory Listing
Modified Thu May 13 23:32:06 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
type -> types in constuctor

Revision 18855 - Directory Listing
Modified Thu May 13 23:31:58 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
type -> types in constuctor

Revision 18854 - Directory Listing
Modified Thu May 13 23:31:40 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
type -> types

Revision 18853 - Directory Listing
Modified Thu May 13 23:25:25 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
some fixes by using the afterRender method.

Revision 18852 - Directory Listing
Modified Thu May 13 21:40:00 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes to make the NotesPortletHeader the size of the portlet

Revision 18851 - Directory Listing
Modified Thu May 13 21:39:43 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes to make the NotesPortletHeader the size of the portlet

Revision 18850 - Directory Listing
Modified Thu May 13 19:37:59 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Returning protege3 package to edu.stanford.bmir.protege.web.server.

Revision 18849 - Directory Listing
Modified Thu May 13 19:28:37 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Returning protege3 package to edu.stanford.bmir.protege.web.server.

Revision 18848 - Directory Listing
Modified Thu May 13 19:27:52 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Returning protege3 package to edu.stanford.bmir.protege.web.server.

Revision 18847 - Directory Listing
Modified Thu May 13 13:58:00 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
refactored LoginUtil class

Revision 18846 - Directory Listing
Modified Thu May 13 13:05:01 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated web.xml. Added loading gif.


Revision 18845 - Directory Listing
Modified Thu May 13 12:57:17 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
1) Added functionality to authenticate user over https using cookies.
2) Made async handlers in LoginUtil as internal classes.

Revision 18844 - Directory Listing
Modified Thu May 13 00:23:43 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Instance Check Boxes are implemented as a superclass of Instance Radio Buttons. The layout of both the insance checkbox and instance radio buttons are fixed to work cross-browsers and iCAT configuration is using checkboxes to select gender and life-cycle properties.

Revision 18842 - Directory Listing
Modified Wed May 12 18:00:30 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Removed timer from this method.

Revision 18841 - Directory Listing
Modified Wed May 12 16:23:51 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Now inherits the crypto from the crypto package; this is necessary for compilation under intellij, and I suspect wasn't working properly in the first place.

Revision 18840 - Directory Listing
Modified Wed May 12 02:15:36 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
merged to WHO revision 18838

Revision 18839 - Directory Listing
Modified Wed May 12 02:15:19 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
merged to WHO revision 18838

Revision 18838 - Directory Listing
Modified Wed May 12 00:23:16 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
sync to revision 18837 from who

Revision 18837 - Directory Listing
Modified Tue May 11 23:52:58 2010 UTC (7 years, 5 months ago) by elliott
Original Path: web-protege
Removing focus timer calls from the code base. These were in place to guarantee that focus was called after the component had been constructed. Tania pointed out that using events is a much nicer way to do this.

Revision 18836 - Directory Listing
Modified Tue May 11 22:04:47 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed some size issues.

Revision 18835 - Directory Listing
Modified Tue May 11 19:35:44 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Bug fix for the always visible Scroll bars

Revision 18834 - Directory Listing
Modified Tue May 11 19:35:29 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Bug fix for the always visible Scroll bars

Revision 18833 - Directory Listing
Modified Tue May 11 18:00:22 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
removing debugging prints

Revision 18832 - Directory Listing
Modified Mon May 10 22:27:14 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Minor fixes/clean-up

Revision 18831 - Directory Listing
Modified Mon May 10 22:14:44 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added back etiologyType, as a drop-down list with meaningful values.

Revision 18830 - Directory Listing
Modified Mon May 10 19:53:14 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Web.xml file using owlapi.

Revision 18829 - Directory Listing
Modified Mon May 10 18:31:23 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Separation of protege3 from common server code (creation of edu.stanford.bmir.protege.web.server.protege3).

Revision 18827 - Directory Listing
Modified Mon May 10 17:02:48 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Solution to decode <map> tags in the configuration file with LinkedHashMaps, so that order of elements is preserved.

Revision 18825 - Directory Listing
Modified Mon May 10 13:41:55 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
First working version of web-protege (with owlapi-mt working).

Revision 18824 - Directory Listing
Modified Sat May 8 18:32:06 2010 UTC (7 years, 5 months ago) by dilvan
Original Path: web-protege
Upload of the owl-api unchanged version from 
https://owlapi.svn.sourceforge.net/svnroot/owlapi v3/trunk 2010/5/7 17:56

Revision 18823 - Directory Listing
Modified Sat May 8 08:12:44 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
A few changes to conform to the updated content model based on the telecon with the ECI TAG.

Revision 18822 - Directory Listing
Modified Sat May 8 06:23:43 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
fixing the styling with styling around scroll bars

Revision 18821 - Directory Listing
Modified Sat May 8 06:23:21 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
fixing the styling with styling around scroll bars

Revision 18820 - Directory Listing
Modified Sat May 8 04:08:12 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added some doc for the properties, and rearranged the order

Revision 18819 - Directory Listing
Modified Sat May 8 01:13:00 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Some changes that don't work properly. Commited for Venu to continue working on it

Revision 18818 - Directory Listing
Modified Fri May 7 23:48:42 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes for scroll bars

Revision 18817 - Directory Listing
Modified Fri May 7 23:48:31 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes for scroll bars

Revision 18816 - Directory Listing
Modified Fri May 7 23:46:48 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
changes for scroll bars

Revision 18815 - Directory Listing
Modified Fri May 7 20:32:08 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed @override

Revision 18814 - Directory Listing
Modified Fri May 7 19:03:11 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fixed bug that allowed users to edit notes created by other users.

Revision 18812 - Directory Listing
Modified Fri May 7 07:45:30 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Changes the NotesPortlet with NotesTreePortlet in the "Category Notes and Discussions" tab

Revision 18811 - Directory Listing
Modified Fri May 7 04:40:36 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
updating onresize methods

Revision 18810 - Directory Listing
Modified Fri May 7 04:40:11 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
bug fix: for fixing the oversize in the header

Revision 18809 - Directory Listing
Modified Fri May 7 04:38:46 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Change in style for NotesTreePortlet

Revision 18808 - Directory Listing
Modified Fri May 7 04:38:26 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Adding initial dimensions to NotesTreePortlet

Revision 18807 - Directory Listing
Modified Fri May 7 01:58:21 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fix for null pointer for when ChAO does not contain an archived slot (backward compatibility fix)

Revision 18805 - Directory Listing
Modified Wed May 5 17:48:25 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Updated Specific Condition Properties Tab

Revision 18794 - Directory Listing
Modified Wed May 5 15:41:46 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
moved createNote to CreateClassPanel

Revision 18793 - Directory Listing
Modified Wed May 5 15:41:22 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
moved createNote to CreateClassPanel

Revision 18792 - Directory Listing
Modified Wed May 5 15:23:36 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
don't create note when creating the class (takes too long)

Revision 18791 - Directory Listing
Modified Wed May 5 15:23:11 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
made some methods public

Revision 18790 - Directory Listing
Modified Wed May 5 15:22:45 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
creating the note in a different call

Revision 18789 - Directory Listing
Modified Wed May 5 09:55:47 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
2 versions of the ICD configuration file, one to be used for the External Causes and Injuries chapter and one for the rest.

Revision 18788 - Directory Listing
Modified Wed May 5 07:18:39 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed the frame listener for now - it generates too many events that are not needed by the client, need a better solution

Revision 18787 - Directory Listing
Modified Wed May 5 07:17:58 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
take out create note from the transaction for creating the class (the drawback is that the annotation count is not always right on the client) 

Revision 18786 - Directory Listing
Modified Wed May 5 07:16:40 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fixed the HasAnnotation cache for creation and deletion

Revision 18785 - Directory Listing
Modified Wed May 5 07:15:32 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added "Legacy " in front of the "Temporal Properties" and " Functional Impact" property labels

Revision 18784 - Directory Listing
Modified Wed May 5 07:15:17 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
moved the sys.out.. it will be removed eventually

Revision 18783 - Directory Listing
Modified Wed May 5 07:14:14 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
try to optimize class creation

Revision 18782 - Directory Listing
Modified Wed May 5 06:34:33 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Change to fix bug when Delete is called

Revision 18781 - Directory Listing
Modified Wed May 5 06:33:43 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Changing for IE

Revision 18780 - Directory Listing
Modified Wed May 5 01:37:06 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
- Removed (read-only) ICD Title from "Type & Use" tab
- Replaced widget for Body System with an external reference widget pointing to the SNOMED Organism view
- removed etiology Type
- updated widget configurations for agent and mechanism to match the fixed Content Model
- Removed widget from Severity Properties tab

Revision 18779 - Directory Listing
Modified Wed May 5 00:31:46 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Improved InstanceGridWidget to avoid refresh after a successful property value update. The widget will reload only if the update failed. Successful update will be acknowledged by the removal of the dirty flag.
+ 2 other bug fixes

Revision 18775 - Directory Listing
Modified Tue May 4 01:39:35 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fix for getEvents - needs a better fix

Revision 18774 - Directory Listing
Modified Tue May 4 01:09:36 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Updated for the new UI. There are still some changes to be made, though!

Revision 18766 - Directory Listing
Modified Mon May 3 11:30:12 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added initial focus on user name textfield for Login and change password window.

Revision 18765 - Directory Listing
Modified Mon May 3 10:09:33 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added gwt-crypto-1.0.3.jar for encryption and decryption on server as well as client side.

Revision 18764 - Directory Listing
Modified Mon May 3 10:03:48 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Added functionality to change password securely using hashing and encryption.

Revision 18758 - Directory Listing
Modified Fri Apr 30 23:12:20 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
minor (formatting)

Revision 18757 - Directory Listing
Modified Fri Apr 30 23:11:27 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Replaced loading.gif with the animated one.

Revision 18756 - Directory Listing
Modified Fri Apr 30 23:11:00 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Arranged ICD configuration file and fixed InstanceRadioButtonWidget to render first two tab more nicely.

Revision 18754 - Directory Listing
Modified Fri Apr 30 18:27:50 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Changed configuration to resemble more the desired UI

Revision 18753 - Directory Listing
Modified Fri Apr 30 17:49:31 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added getNumChanges - Venu forgot to commit

Revision 18752 - Directory Listing
Modified Fri Apr 30 04:54:42 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated Hashing feature for login functionality.

Revision 18751 - Directory Listing
Modified Fri Apr 30 03:37:02 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added Lazy load feature for notes

Revision 18750 - Directory Listing
Modified Fri Apr 30 03:36:43 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added Lazy load feature and also different styles for achive

Revision 18749 - Directory Listing
Modified Fri Apr 30 03:36:32 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added Lazy load feature and also different styles for achive

Revision 18748 - Directory Listing
Modified Fri Apr 30 03:36:14 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added Lazy load feature and also different styles for achive

Revision 18747 - Directory Listing
Modified Fri Apr 30 03:34:48 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added rpc for lazy loading of notes

Revision 18746 - Directory Listing
Modified Fri Apr 30 03:34:38 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added rpc for lazy loading of notes

Revision 18745 - Directory Listing
Modified Fri Apr 30 03:34:21 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added rpc for lazy loading of notes

Revision 18744 - Directory Listing
Modified Fri Apr 30 03:33:42 2010 UTC (7 years, 5 months ago) by kasturi
Original Path: web-protege
Added new styles for Archive mode

Revision 18743 - Directory Listing
Modified Fri Apr 30 01:46:04 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
read the real map for allowed values

Revision 18742 - Directory Listing
Modified Fri Apr 30 01:45:41 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added disease type as radio boxes

Revision 18741 - Directory Listing
Modified Fri Apr 30 01:41:24 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
home page for iCAT

Revision 18740 - Directory Listing
Modified Fri Apr 30 01:28:20 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed @Override

Revision 18739 - Directory Listing
Modified Fri Apr 30 01:23:51 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fix for null pointer in removePropertyValue and getProtegeObject

Revision 18738 - Directory Listing
Modified Fri Apr 30 01:23:10 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added radio instance button

Revision 18737 - Directory Listing
Modified Fri Apr 30 01:22:40 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added  InstanceRadioButton

Revision 18736 - Directory Listing
Modified Fri Apr 30 01:22:19 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added load URL option to HTMLMessageProperty and HTMLMessageWidget through the property "load_url".

Revision 18735 - Directory Listing
Modified Fri Apr 30 01:22:15 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
InstanceRadioButton

Revision 18734 - Directory Listing
Modified Fri Apr 30 01:20:26 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed protege.properites restricted access: DevMode has a bug:
http://code.google.com/p/google-web-toolkit/issues/detail?id=4462

Revision 18733 - Directory Listing
Modified Fri Apr 30 01:19:47 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
extra lines for security in web.xml

Revision 18732 - Directory Listing
Modified Fri Apr 30 00:30:51 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fix for race condition in date format

Revision 18720 - Directory Listing
Modified Thu Apr 29 21:28:51 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
- 2 changes to InstanceGridWidget:
    tooltips can be added to headers
    warning when trying to edit cells without signing in
- Added "sorting label" column to ICDLinearizationWidget.

Revision 18719 - Directory Listing
Modified Thu Apr 29 19:31:40 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
clean up code

Revision 18718 - Directory Listing
Modified Thu Apr 29 19:26:34 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed system.out

Revision 18717 - Directory Listing
Modified Thu Apr 29 19:25:45 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed system.out

Revision 18716 - Directory Listing
Modified Thu Apr 29 19:23:38 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
null pointer fixes

Revision 18715 - Directory Listing
Modified Thu Apr 29 19:03:38 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Added sorting option to InstanceGridWidget and fixed ICDlinearization widget to correctly work with the modified InstanceGridWidget.

Revision 18714 - Directory Listing
Modified Thu Apr 29 18:18:29 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fixed dtd validation errors

Revision 18713 - Directory Listing
Modified Thu Apr 29 18:10:29 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
Added restriction on the protege.properties access. Thank you to Stefan Fenz for the solution!

Revision 18712 - Directory Listing
Modified Thu Apr 29 17:50:12 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
comment a method to make it compile

Revision 18704 - Directory Listing
Modified Wed Apr 28 19:42:21 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed commented out code

Revision 18703 - Directory Listing
Modified Wed Apr 28 19:06:52 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added  getEntityPropertyValues

Revision 18702 - Directory Listing
Modified Wed Apr 28 19:06:32 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
changed logic:
- when entity changes ->
1. set subject for all widgets in all tabs
2. fill values for the widgets of the active tab

- restructured the needsFormGenerator.. more is coming


Revision 18701 - Directory Listing
Modified Wed Apr 28 19:05:16 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
- more optimizations: used the  getEntityPropertyValues to fill the values, so that we have a better structure to add to the store
- use a dataproxy rather than making changes to the store records directly

Revision 18700 - Directory Listing
Modified Wed Apr 28 19:03:47 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added more methods to be able to get the widgets in a tab; added map to hold this information

Revision 18699 - Directory Listing
Modified Wed Apr 28 19:03:07 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
- changed logic .. again
- set subject does not fill values
- removed listener

Revision 18698 - Directory Listing
Modified Wed Apr 28 19:01:59 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
used for  getEntityPropertyValues

Revision 18697 - Directory Listing
Modified Wed Apr 28 19:01:46 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added  getEntityPropertyValues

Revision 18696 - Directory Listing
Modified Wed Apr 28 18:50:15 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
icdNumericalCode -> sortingLabel

Revision 18690 - Directory Listing
Modified Wed Apr 28 13:11:29 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Updated OpenId servlets

Revision 18689 - Directory Listing
Modified Wed Apr 28 07:21:57 2010 UTC (7 years, 5 months ago) by zeeshan
Original Path: web-protege
Refactored code in LoginUtil and authenticationServlet

Revision 18667 - Directory Listing
Modified Tue Apr 27 03:49:33 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Refactored HtmlMessagePortlet so that it can be used also as a widget (HtmlMessageWidget) within another UI component.

Revision 18666 - Directory Listing
Modified Tue Apr 27 03:36:53 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Fix to deal with Boolean values also.

Revision 18665 - Directory Listing
Modified Tue Apr 27 03:33:39 2010 UTC (7 years, 5 months ago) by nyulas
Original Path: web-protege
Minor fix to bubble up causing exception in the getProjectConfiguration method.

Revision 18664 - Directory Listing
Modified Tue Apr 27 00:44:37 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
added a config for pizza

Revision 18663 - Directory Listing
Modified Mon Apr 26 23:30:25 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
sources for the changed owl-api classes

Revision 18662 - Directory Listing
Modified Mon Apr 26 23:13:16 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
removed unused imports

Revision 18661 - Directory Listing
Modified Mon Apr 26 23:11:53 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fixed config for new configuration format:added <project> <tabs>

Revision 18660 - Directory Listing
Modified Mon Apr 26 23:11:21 2010 UTC (7 years, 5 months ago) by tudorache
Original Path: web-protege
fixed config for new configuration format:added <project> <tabs>

Revision 18659 - Directory Listing
Modified Mon Apr 26 22:35:40 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
getDate , setDate -> getCreationDate, setCreationDate

Revision 18650 - Directory Listing
Modified Mon Apr 26 13:56:05 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
converted static functions to non static (including login function)
Added encryption feature to login functionality

Revision 18606 - Directory Listing
Modified Sat Apr 24 00:38:42 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
NotesDataComparator for checking latest change to the child

Revision 18605 - Directory Listing
Modified Sat Apr 24 00:38:13 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Refactoring and also using NotesDataComparator

Revision 18604 - Directory Listing
Modified Sat Apr 24 00:37:46 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Refactoring

Revision 18603 - Directory Listing
Modified Sat Apr 24 00:37:01 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
checking for replies == null when using note.getreplies

Revision 18602 - Directory Listing
Modified Sat Apr 24 00:34:30 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Using the NoteData's type as the default combo box value for Editing

Revision 18601 - Directory Listing
Modified Sat Apr 24 00:33:51 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Refactoring to send NotesData to NoteInputPanel

Revision 18600 - Directory Listing
Modified Sat Apr 24 00:33:19 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Refactoring to creationDate and latestUpdate

Revision 18584 - Directory Listing
Modified Fri Apr 23 16:17:35 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18583 - Directory Listing
Modified Fri Apr 23 15:38:08 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18582 - Directory Listing
Modified Fri Apr 23 15:33:58 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18581 - Directory Listing
Modified Fri Apr 23 15:23:58 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18580 - Directory Listing
Modified Fri Apr 23 15:22:53 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18579 - Directory Listing
Modified Fri Apr 23 15:22:05 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18578 - Directory Listing
Modified Fri Apr 23 15:20:08 2010 UTC (7 years, 6 months ago) by dilvan
Original Path: web-protege
First update, including the read methods only and owl-api modified jar file (with support to multi-threaded reads).

Revision 18577 - Directory Listing
Modified Fri Apr 23 01:26:04 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
ArrayList -> List

Revision 18576 - Directory Listing
Modified Fri Apr 23 01:25:07 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor refactor

Revision 18575 - Directory Listing
Modified Fri Apr 23 01:23:54 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
replaced hasDateObj

Revision 18574 - Directory Listing
Modified Fri Apr 23 01:23:30 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed hasDateObj

Revision 18573 - Directory Listing
Modified Fri Apr 23 01:11:07 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
change back

Revision 18572 - Directory Listing
Modified Fri Apr 23 01:08:58 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
fixing bug for null date

Revision 18571 - Directory Listing
Modified Fri Apr 23 01:08:43 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
updating editing of type of the note, fixing bug for null date

Revision 18570 - Directory Listing
Modified Fri Apr 23 01:08:19 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
updating editing of type of the note

Revision 18569 - Directory Listing
Modified Fri Apr 23 01:07:26 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
calling onFailure on cancel button

Revision 18568 - Directory Listing
Modified Fri Apr 23 01:07:07 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Updating to check for caught==null from notes input panel

Revision 18567 - Directory Listing
Modified Thu Apr 22 23:49:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fixed spelling mistake

Revision 18566 - Directory Listing
Modified Thu Apr 22 23:48:13 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fixed spelling mistake

Revision 18565 - Directory Listing
Modified Thu Apr 22 19:52:23 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
updated configuration file for Collaborative Pizza to conform the to new configuration file structure.

Revision 18564 - Directory Listing
Modified Thu Apr 22 19:21:28 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
Intermediate state that solves compilation error. Class needs some more  changes.

Revision 18562 - Directory Listing
Modified Thu Apr 22 16:05:12 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
the real null pointer fix

Revision 18561 - Directory Listing
Modified Thu Apr 22 15:58:52 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
null pointer check, Venu please fix the rest

Revision 18558 - Directory Listing
Modified Thu Apr 22 06:01:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
commented out code that did not compile

Revision 18557 - Directory Listing
Modified Thu Apr 22 05:58:40 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
null check

Revision 18554 - Directory Listing
Modified Tue Apr 20 23:52:52 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
another fix or duplication

Revision 18553 - Directory Listing
Modified Tue Apr 20 23:22:22 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
util method

Revision 18552 - Directory Listing
Modified Tue Apr 20 23:22:10 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
try to handle the duplication of values when user is too fast

Revision 18551 - Directory Listing
Modified Tue Apr 20 23:21:57 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
try to handle the duplication of values when user is too fast

Revision 18550 - Directory Listing
Modified Tue Apr 20 22:17:32 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fix for col


Revision 18547 - Directory Listing
Modified Tue Apr 20 20:17:28 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored to icd package

Revision 18546 - Directory Listing
Modified Tue Apr 20 20:16:55 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored icd title class

Revision 18545 - Directory Listing
Modified Tue Apr 20 20:16:39 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored to icd package

Revision 18544 - Directory Listing
Modified Tue Apr 20 20:16:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
the icd linearization widget- doesn't compile; Csongor will fix

Revision 18543 - Directory Listing
Modified Tue Apr 20 20:15:31 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor refactor

Revision 18542 - Directory Listing
Modified Tue Apr 20 20:15:21 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
integrating Csongor's changes: try to make it more extensible for columns

Revision 18533 - Directory Listing
Modified Tue Apr 20 19:41:53 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
Added new constants, used for/by the ICDLinearizationWidget and the HTMLMessageWidget and Portlet

Revision 18527 - Directory Listing
Modified Tue Apr 20 16:39:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
recommiting a backwards compatibility fix that was lost

Revision 18526 - Directory Listing
Modified Tue Apr 20 07:46:48 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
null check... 

Revision 18525 - Directory Listing
Modified Tue Apr 20 07:24:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
just a slight optimization

Revision 18524 - Directory Listing
Modified Tue Apr 20 07:23:27 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
onRefresh of tree restore old selection

Revision 18523 - Directory Listing
Modified Tue Apr 20 06:25:59 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fix for add link disappearing

Revision 18522 - Directory Listing
Modified Mon Apr 19 23:42:55 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added test for multiple values to show the add new value link

Revision 18456 - Directory Listing
Modified Fri Apr 16 22:30:16 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
don't include generated artifacts

Revision 18455 - Directory Listing
Modified Fri Apr 16 22:29:52 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
ide specific stuff

Revision 18454 - Directory Listing
Modified Fri Apr 16 22:29:34 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
no .classpath .project

Revision 18453 - Directory Listing
Modified Fri Apr 16 22:29:13 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
removed the heart

Revision 18452 - Directory Listing
Modified Fri Apr 16 22:28:52 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege


Revision 18451 - Directory Listing
Modified Fri Apr 16 22:28:35 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
doesn't need a trunk / branch/tags

Revision 18450 - Directory Listing
Modified Fri Apr 16 22:27:45 2010 UTC (7 years, 6 months ago) by tredmond
Original Path: web-protege
this guy is a branch

Revision 18449 - Directory Listing
Modified Fri Apr 16 22:21:43 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
not used anymore

Revision 18448 - Directory Listing
Modified Fri Apr 16 22:21:12 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
not used

Revision 18447 - Directory Listing
Modified Fri Apr 16 22:13:54 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
branch for Dilvan

Revision 18446 - Directory Listing
Modified Fri Apr 16 17:29:51 2010 UTC (7 years, 6 months ago) by falconer
Original Path: web-protege
I moved the change analysis services into a ChAOStatsService class.

Revision 18445 - Directory Listing
Modified Fri Apr 16 12:41:33 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Refactored code Updated following functions/Classes in LoginUtil as non-static
•	Functions In LoginUtil.java
o	createNewUserToAssociateOpenId()
o	performSignInToAssociateOpenId()
o	createNewUserToAssociateOpenId()
o	enquireOpenIdAssociation()
o	loginToAssociateOpenId()
•	Handler Classes in LoginUtil.java
o	createNewUserToAssocOpenIdHandler
o	EditProfileHandler
o	SignInToAssocOpenIdHandler
o	IsAuthenticateWithOpenIdHandler


Revision 18444 - Directory Listing
Modified Fri Apr 16 08:17:24 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fixx

Revision 18443 - Directory Listing
Modified Fri Apr 16 07:59:13 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
setValues split in two methods

Revision 18442 - Directory Listing
Modified Fri Apr 16 07:58:48 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
set the values - check again later

Revision 18441 - Directory Listing
Modified Fri Apr 16 07:24:42 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor

Revision 18440 - Directory Listing
Modified Fri Apr 16 07:18:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
made show toolbar configurable by project property

Revision 18439 - Directory Listing
Modified Fri Apr 16 07:17:39 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
changed project configuration: the xml now returns a ProjectConfiguration

Revision 18438 - Directory Listing
Modified Fri Apr 16 07:16:12 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
use ICDClassPortlet
new configuration: project can also have properties

Revision 18437 - Directory Listing
Modified Fri Apr 16 06:47:31 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
reenabling create class - to be removed because it is icd specific

Revision 18436 - Directory Listing
Modified Fri Apr 16 06:36:15 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
doLayout after creating the form panel

Revision 18435 - Directory Listing
Modified Fri Apr 16 06:27:41 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
unneeded

Revision 18434 - Directory Listing
Modified Fri Apr 16 06:14:11 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
restore to previous version, found out what the problem with icd.jar was

Revision 18433 - Directory Listing
Modified Fri Apr 16 06:13:10 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
found out the error, restoring icd.jar

Revision 18432 - Directory Listing
Modified Fri Apr 16 05:48:28 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
a desperate attempt to solve a tomcat classloading problem. These classes should not stay here.

Revision 18431 - Directory Listing
Modified Fri Apr 16 05:47:13 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
a desperate attempt to solve a tomcat classloading problem. These classes should not stay here.

Revision 18426 - Directory Listing
Modified Fri Apr 16 03:33:34 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
another desperate attempt..

Revision 18425 - Directory Listing
Modified Fri Apr 16 03:23:07 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
new desperate attempt..

Revision 18424 - Directory Listing
Modified Fri Apr 16 03:07:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
got rid of @override

Revision 18423 - Directory Listing
Modified Fri Apr 16 03:06:30 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
got rid of @override

Revision 18422 - Directory Listing
Modified Fri Apr 16 03:05:38 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added the icd class tree portlet

Revision 18421 - Directory Listing
Modified Fri Apr 16 03:02:31 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
the icd class tree portlet

Revision 18420 - Directory Listing
Modified Fri Apr 16 03:01:50 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
made the class tree portlet more extensible so that we can create a custom ICD class tree portlet

Revision 18419 - Directory Listing
Modified Fri Apr 16 02:34:35 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed comment

Revision 18418 - Directory Listing
Modified Fri Apr 16 02:33:26 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
backwards compatibility fix

Revision 18417 - Directory Listing
Modified Fri Apr 16 01:34:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
support for linearization and external causes

Revision 18416 - Directory Listing
Modified Fri Apr 16 01:33:40 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
using other create method for icd class

Revision 18411 - Directory Listing
Modified Thu Apr 15 21:36:43 2010 UTC (7 years, 6 months ago) by falconer
Original Path: web-protege
Added change analysis plugin

Revision 18409 - Directory Listing
Modified Thu Apr 15 18:20:47 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed override

Revision 18407 - Directory Listing
Modified Thu Apr 15 13:44:55 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Updated Protege.properties

Revision 18406 - Directory Listing
Modified Thu Apr 15 13:42:16 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Separated Async Callback from respective functions
Updated code to closed all the timers. And have set the maximum timer time to 15 minutes.
Updated Edit Profile Window to show OpenId List and AddNewOpen Id button even if Authentication with Open id is disabled.


Revision 18405 - Directory Listing
Modified Thu Apr 15 07:36:39 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
adding style for the Archive anchor

Revision 18404 - Directory Listing
Modified Thu Apr 15 07:36:15 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
added the edit and archive functionalities

Revision 18403 - Directory Listing
Modified Thu Apr 15 07:36:13 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
return null for getEvents, to make the remote calls more efficient

Revision 18402 - Directory Listing
Modified Thu Apr 15 07:35:59 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
added the edit and archive functionalities

Revision 18401 - Directory Listing
Modified Thu Apr 15 07:35:56 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
return null for some methods, to make the remote calls more efficient

Revision 18400 - Directory Listing
Modified Thu Apr 15 07:35:49 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
added the edit and archive functionalities

Revision 18399 - Directory Listing
Modified Thu Apr 15 07:35:39 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
added the edit and archive functionalities

Revision 18398 - Directory Listing
Modified Thu Apr 15 07:35:26 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
optimized for less remote calls

Revision 18397 - Directory Listing
Modified Thu Apr 15 07:35:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
testing for null in remote call results

Revision 18396 - Directory Listing
Modified Thu Apr 15 07:31:36 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
testing for null in remote call results

Revision 18395 - Directory Listing
Modified Thu Apr 15 07:29:13 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
testing for null in remote call results

Revision 18394 - Directory Listing
Modified Thu Apr 15 06:22:53 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added a new getEntityTriples method to optimize the retrieval of reified instances as values

Revision 18393 - Directory Listing
Modified Thu Apr 15 06:22:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed @Override

Revision 18392 - Directory Listing
Modified Thu Apr 15 06:20:48 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added a new getEntityTriples method to optimized the retrieval of reified instances as values

Revision 18391 - Directory Listing
Modified Thu Apr 15 06:20:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
Hyperlink -> Anchor

Revision 18390 - Directory Listing
Modified Thu Apr 15 06:19:35 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
split fillValues in 2 methods to make it more reusable

Revision 18389 - Directory Listing
Modified Thu Apr 15 06:19:02 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
optimizing the code even more - make a different getEntityTriples call to get directly the aggregated reified values.

Revision 18388 - Directory Listing
Modified Thu Apr 15 02:00:19 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
just a comment

Revision 18387 - Directory Listing
Modified Thu Apr 15 01:57:05 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored GetTriples -> GetTriplesHandler

Revision 18386 - Directory Listing
Modified Thu Apr 15 01:56:44 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored GetTriples -> GetTriplesHandler

Revision 18385 - Directory Listing
Modified Thu Apr 15 01:56:12 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
make sure that fillValues is as lazy as possible

Revision 18378 - Directory Listing
Modified Wed Apr 14 10:33:59 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Removed unwanted variables in AuthenticationServlet

Revision 18377 - Directory Listing
Modified Wed Apr 14 04:20:22 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
using default timestamp formatter

Revision 18376 - Directory Listing
Modified Wed Apr 14 04:20:14 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18375 - Directory Listing
Modified Wed Apr 14 04:20:00 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
using default timestamp formatter

Revision 18374 - Directory Listing
Modified Wed Apr 14 04:19:39 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18373 - Directory Listing
Modified Wed Apr 14 04:19:30 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18372 - Directory Listing
Modified Wed Apr 14 04:19:11 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18371 - Directory Listing
Modified Wed Apr 14 04:19:00 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18370 - Directory Listing
Modified Wed Apr 14 04:18:49 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding methods for Edit and Archive

Revision 18369 - Directory Listing
Modified Wed Apr 14 04:18:26 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding isArchived field

Revision 18366 - Directory Listing
Modified Tue Apr 13 17:08:57 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Updated protege.properties, added property webprotege.authenticate.with.openid

Revision 18365 - Directory Listing
Modified Tue Apr 13 17:05:53 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Added Getters for Property webprotege.authenticate.with.openid

Revision 18364 - Directory Listing
Modified Tue Apr 13 13:07:22 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Implemented Functionality to configure openid functionality from property file : protege.properties.
(openid functionality can be able/disable from protege.properties)


Revision 18363 - Directory Listing
Modified Tue Apr 13 04:32:19 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
adding the  css for NotesTreePortlet

Revision 18362 - Directory Listing
Modified Tue Apr 13 04:31:44 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
adding the NotesTreePortlet

Revision 18361 - Directory Listing
Modified Tue Apr 13 04:29:20 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Added the css file for Notes tree

Revision 18360 - Directory Listing
Modified Tue Apr 13 04:28:31 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
server side date util for the NotesData

Revision 18359 - Directory Listing
Modified Tue Apr 13 04:28:10 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
util used for sorting the notes based on the latest update

Revision 18358 - Directory Listing
Modified Tue Apr 13 04:27:21 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Added changes for the getNotes method

Revision 18357 - Directory Listing
Modified Tue Apr 13 04:25:17 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Added changes for the Notes Tree Portlet

Revision 18356 - Directory Listing
Modified Tue Apr 13 04:24:14 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding the NotesTreePortlet

Revision 18355 - Directory Listing
Modified Tue Apr 13 04:21:35 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Contains Util for getting the latest update string

Revision 18354 - Directory Listing
Modified Tue Apr 13 04:20:20 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Represents the UI part of a NotesData obj

Revision 18353 - Directory Listing
Modified Tue Apr 13 04:16:57 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Portlet which contains the notes as a tree

Revision 18352 - Directory Listing
Modified Tue Apr 13 04:15:38 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Contains a flex table which holds the toplevel set of notes

Revision 18351 - Directory Listing
Modified Tue Apr 13 04:10:26 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Handles the notes reply and post

Revision 18350 - Directory Listing
Modified Tue Apr 13 04:07:29 2010 UTC (7 years, 6 months ago) by kasturi
Original Path: web-protege
Adding the latest update date, implementing the Comparable interface

Revision 18346 - Directory Listing
Modified Tue Apr 13 00:09:05 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
Added search option "includeproperties=1" for all SNOMED views

Revision 18345 - Directory Listing
Modified Mon Apr 12 22:58:46 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
change prj name (committed by mistake another ICD prj name)

Revision 18340 - Directory Listing
Modified Mon Apr 12 13:08:00 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
added open id provider myvidoop icon 

Revision 18337 - Directory Listing
Modified Mon Apr 12 12:58:09 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Refactored code.
Improved OpenId Popup GUI.

Revision 18320 - Directory Listing
Modified Fri Apr 9 12:52:20 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Removed Syso 's

Revision 18319 - Directory Listing
Modified Fri Apr 9 12:49:45 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Updated Openid Functionality, which uses RPC call instead of Cookie
     

Revision 18305 - Directory Listing
Modified Thu Apr 8 13:13:18 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
commited css file WebProtege , added css for blue-links.

Revision 18304 - Directory Listing
Modified Thu Apr 8 13:09:25 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Committed the code for following:
•	Refactored all EditProfile code to its own class EditProfileUtil and updated EditProfile code to remove static methods and fields.
•	Replaced static methods where not required.
•	Removed ProtScrollPanel.
•	Refactored larger methods to appropriate smaller ones.
•	Removed the code from iCat.java and WebProtege.java.


Revision 18303 - Directory Listing
Modified Thu Apr 8 06:19:16 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
fix for getAllowedOperations

Revision 18294 - Directory Listing
Modified Tue Apr 6 23:34:54 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
Some old code for class level statistic representation. We can throw away this code and the rest of the code dealing with statistics, once we integrate Sean's work.

Revision 18293 - Directory Listing
Modified Tue Apr 6 23:24:29 2010 UTC (7 years, 6 months ago) by vendetti
Original Path: web-protege


Revision 18287 - Directory Listing
Modified Tue Apr 6 13:33:30 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
committed web.xml to remove mapping related to openid module

Revision 18286 - Directory Listing
Modified Tue Apr 6 13:32:16 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Committed code with following functionatlity:
1.	Added "Associate Open Id" in a disclosure panel, by default closed and related funtionality
2.	Created constants for strings in openid module
3.	Replaced concat functionality to simple add.


Revision 18239 - Directory Listing
Modified Fri Apr 2 23:09:48 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
merged to WHO branch 18238

Revision 18238 - Directory Listing
Modified Fri Apr 2 22:47:55 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
merge from WHO branch: 18011 -> 18236

Revision 18237 - Directory Listing
Modified Fri Apr 2 22:47:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
merge from WHO branch: 18011 -> 18236

Revision 18236 - Directory Listing
Modified Fri Apr 2 22:21:42 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added loading icon

Revision 18235 - Directory Listing
Modified Fri Apr 2 22:20:46 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor

Revision 18234 - Directory Listing
Modified Fri Apr 2 22:20:28 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
major change: events now carry the server revision

Revision 18233 - Directory Listing
Modified Fri Apr 2 22:20:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
different implementation for hsaValidCredentials

Revision 18232 - Directory Listing
Modified Fri Apr 2 22:19:44 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
getEvents returns a list of OntologyEvents

Revision 18231 - Directory Listing
Modified Fri Apr 2 22:19:16 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor; casts

Revision 18230 - Directory Listing
Modified Fri Apr 2 22:18:36 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
Hyperlink -> Anchor
bigger search window

Revision 18229 - Directory Listing
Modified Fri Apr 2 22:18:07 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
store a list of widgets
load values control is now in the widgets, not centralized

Revision 18228 - Directory Listing
Modified Fri Apr 2 22:04:34 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
major refactor - refresh now is controlled by this widget
removed unneeded code
Hyperlink -> Anchor

Revision 18227 - Directory Listing
Modified Fri Apr 2 22:01:56 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
Hyperlink -> Anchor to get rid of deprecation

Revision 18226 - Directory Listing
Modified Fri Apr 2 22:01:00 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
major refactor: each property widget is now in charge for retrieving the values from the server. Before the FormGenerator would have centralized control over when the values are retrieved. This allows lazy loading of values, and also the refresh of only one widget.
The logic is: - set the subject of the property widget when the selection changes for the portlet; 
- use a layout listener and load the values from the server only if the widget is visible, and the old subject and the new subject are different

Revision 18225 - Directory Listing
Modified Fri Apr 2 22:00:26 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed commented code

Revision 18224 - Directory Listing
Modified Fri Apr 2 21:57:59 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
still a skeleton for the checkbox widget

Revision 18223 - Directory Listing
Modified Fri Apr 2 21:57:35 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
Hyperlink -> Anchor to get rid of deprecation
refactored some of the constants

Revision 18222 - Directory Listing
Modified Fri Apr 2 21:56:32 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
changed getComponent from Widget -> Component. This means that we'll have to wrap GWT widgets in a GWT-Ext panel.. pretty bad. 
The main reason for this is that gwt-ext as a method: isVisible(true) that I could not find in GWT and that is used in the reload mechanism of the property widget

Revision 18221 - Directory Listing
Modified Fri Apr 2 21:55:08 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored out the notes code so that it doesn't clutter the AbstractPropertyWidget

Revision 18220 - Directory Listing
Modified Fri Apr 2 21:54:40 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
major refactor: each property widget is now in charge for retrieving the values from the server. Before the FormGenerator would have centralized control over when the values are retrieved. This allows lazy loading of values, and also the refresh of only one widget.
The logic is: - set the subject of the property widget when the selection changes for the portlet; 
- use a layout listener and load the values from the server only if the widget is visible, and the old subject and the new subject are different

Revision 18219 - Directory Listing
Modified Fri Apr 2 21:51:20 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
- added revision as a field
- we get the revision from the events
- each portlet will know what server revision it is displaying (can be used later for optimizing refresh)

Revision 18218 - Directory Listing
Modified Fri Apr 2 21:50:11 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor
ArrayList -> List
refresh from server takes an argument

Revision 18217 - Directory Listing
Modified Fri Apr 2 21:49:38 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor

Revision 18216 - Directory Listing
Modified Fri Apr 2 21:49:26 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
-removed some unneeded code
- refresh from server takes now an argument

Revision 18215 - Directory Listing
Modified Fri Apr 2 21:48:47 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
minor rename

Revision 18214 - Directory Listing
Modified Fri Apr 2 21:48:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
getEvents now returns a list of OntologyEvents

Revision 18213 - Directory Listing
Modified Fri Apr 2 21:47:47 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
deleted some comments

Revision 18212 - Directory Listing
Modified Fri Apr 2 21:47:27 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
OntologyEvent is now an interface implemented by all ontology events

Revision 18211 - Directory Listing
Modified Fri Apr 2 21:46:53 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added the revision field in the superclass


Revision 18210 - Directory Listing
Modified Fri Apr 2 21:45:50 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added revision field and getter
implements now the OntologyEvent interface

Revision 18209 - Directory Listing
Modified Fri Apr 2 21:45:11 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
make sure that the timer is not created severeal times
refactored some of the ontology events
each event has now the server revision info attached to it

Revision 18208 - Directory Listing
Modified Fri Apr 2 21:43:51 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
removed the event preview code

Revision 18186 - Directory Listing
Modified Fri Apr 2 00:06:16 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added "ID" as record type

Revision 18185 - Directory Listing
Modified Thu Apr 1 23:25:20 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added recordType method

Revision 18184 - Directory Listing
Modified Thu Apr 1 23:24:56 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added more columns in the search grid (preferred name, found in)
refactored out constants

Revision 18183 - Directory Listing
Modified Thu Apr 1 23:24:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
styles for the bp search panel

Revision 18180 - Directory Listing
Modified Thu Apr 1 19:02:45 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
refactored out BioPortal constants in their own class

Revision 18179 - Directory Listing
Modified Thu Apr 1 18:58:33 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
deleted commented out code

Revision 18176 - Directory Listing
Modified Thu Apr 1 13:36:21 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Added icons for open id providers: myid.net , myspace , myvidoop and verisign 

Revision 18175 - Directory Listing
Modified Thu Apr 1 13:34:50 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Includes following updates
•	Display OpenId provider Window in center
•	Scroll bar is displayed in Providers authentication window.
•	Technorati is replace with Verisign.
•	Removed the window which enquires users name for open Id authentication.Instead now it directly goes to the provider.


Revision 18136 - Directory Listing
Modified Tue Mar 30 13:14:30 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Added Jars commons-codec-1.2.jar and commons-httpclient-3.1.jar
for open id functionality in webserver

Revision 18135 - Directory Listing
Modified Tue Mar 30 13:10:29 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Added OpenId add/remove functionality.
Added functionality so that components to be centralized when window is resized.
Changed OpenId icons to smaller and transparent background ones.
Updated style of 'More...' link.


Revision 18134 - Directory Listing
Modified Tue Mar 30 13:08:20 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
Deleted Openid.gwt.xml
Deleted Openid.java
Not required any more. shifted openid functionality to webprotege module.

Revision 18133 - Directory Listing
Modified Tue Mar 30 13:05:50 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege
deleted Openid.html

Revision 18127 - Directory Listing
Modified Tue Mar 30 05:40:12 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
minor change: deleted a commented line that referred to an older way to build BioPortal access URLs

Revision 18126 - Directory Listing
Modified Tue Mar 30 05:36:18 2010 UTC (7 years, 6 months ago) by nyulas
Original Path: web-protege
Changed the constants used in the construction of the BioPortal reference URLs.

Revision 18119 - Directory Listing
Modified Mon Mar 29 23:42:24 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added merge status

Revision 18105 - Directory Listing
Modified Mon Mar 29 13:41:29 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege


Revision 18104 - Directory Listing
Modified Mon Mar 29 13:40:18 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege


Revision 18103 - Directory Listing
Modified Mon Mar 29 13:38:50 2010 UTC (7 years, 6 months ago) by zeeshan
Original Path: web-protege


Revision 18086 - Directory Listing
Modified Mon Mar 29 00:50:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
jar for open id

Revision 18085 - Directory Listing
Modified Mon Mar 29 00:49:56 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid servlets

Revision 18084 - Directory Listing
Modified Mon Mar 29 00:49:35 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid icons

Revision 18083 - Directory Listing
Modified Mon Mar 29 00:49:24 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
css

Revision 18082 - Directory Listing
Modified Mon Mar 29 00:49:14 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid html

Revision 18081 - Directory Listing
Modified Mon Mar 29 00:49:03 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid servlets

Revision 18080 - Directory Listing
Modified Mon Mar 29 00:48:45 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
open id service impl

Revision 18079 - Directory Listing
Modified Mon Mar 29 00:48:29 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid panels

Revision 18078 - Directory Listing
Modified Mon Mar 29 00:48:17 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added edit profile

Revision 18077 - Directory Listing
Modified Mon Mar 29 00:43:15 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added openid services

Revision 18076 - Directory Listing
Modified Mon Mar 29 00:42:49 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
openid entry point

Revision 18075 - Directory Listing
Modified Mon Mar 29 00:42:09 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added openid servlets

Revision 18074 - Directory Listing
Modified Mon Mar 29 00:41:46 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
the openid module

Revision 18073 - Directory Listing
Modified Mon Mar 29 00:41:34 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege
added openid sevlets

Revision 18072 - Directory Listing
Modified Mon Mar 29 00:27:29 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18071 - Directory Listing
Modified Mon Mar 29 00:27:14 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18070 - Directory Listing
Modified Mon Mar 29 00:27:02 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18069 - Directory Listing
Modified Mon Mar 29 00:26:44 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18068 - Directory Listing
Modified Mon Mar 29 00:26:32 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18067 - Directory Listing
Modified Mon Mar 29 00:26:19 2010 UTC (7 years, 6 months ago) by tudorache
Original Path: web-protege


Revision 18012 - Directory Listing
Modified Thu Mar 25 07:07:39 2010 UTC (7 years, 7 months ago) by nyulas
Original Path: web-protege
Changed BP Reference widget defaults to BioPortal production

Revision 18011 - Directory Listing
Modified Thu Mar 25 07:07:00 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
fix for getting the ontology notes

Revision 18010 - Directory Listing
Modified Thu Mar 25 07:06:27 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
shows ontology notes

Revision 18009 - Directory Listing
Modified Thu Mar 25 07:06:17 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
fixes to show the top level notes

Revision 18008 - Directory Listing
Modified Thu Mar 25 07:05:47 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added ontology notes tab

Revision 17996 - Directory Listing
Modified Wed Mar 24 18:41:46 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege


Revision 17933 - Directory Listing
Modified Fri Mar 19 22:31:53 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
- added Edit profile menu
- fix from Optra

Revision 17932 - Directory Listing
Modified Fri Mar 19 22:29:03 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
- added "edit profile" option menu
- fixed the focus problem for the login text field
- Fixes from Optra

Revision 17911 - Directory Listing
Modified Thu Mar 18 01:29:23 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
just using a common abstract superclass for the project managers, most methods will go there

Revision 17800 - Directory Listing
Modified Sat Mar 13 01:42:22 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
changing "Relations" -> "Related properties"

Revision 17799 - Directory Listing
Modified Sat Mar 13 01:38:09 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
took out create class because it is ICD specific

Revision 17798 - Directory Listing
Modified Sat Mar 13 01:37:47 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
made a method protected

Revision 17797 - Directory Listing
Modified Sat Mar 13 01:02:39 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added getRelatedProperties -> to get the things from the PropertiesView in the rich client
the method does not return the right things for OWL: it shows inherited domains to subclasses, which is not correct in owl... but intuitive

Revision 17796 - Directory Listing
Modified Sat Mar 13 01:01:38 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added comment

Revision 17795 - Directory Listing
Modified Sat Mar 13 01:01:24 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
this portlet should eventually show what the properties view shows in the rich client. Right now only shows template slots and properties in the domain of the class

Revision 17794 - Directory Listing
Modified Sat Mar 13 01:00:37 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added the PropertiesViewPortlet

Revision 17793 - Directory Listing
Modified Sat Mar 13 01:00:16 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added getRelatedProperties -> to get the things from the PropertiesView in the rich client

Revision 17787 - Directory Listing
Modified Fri Mar 12 03:51:42 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
fix for getSelection

Revision 17778 - Directory Listing
Modified Thu Mar 11 21:55:03 2010 UTC (7 years, 7 months ago) by tredmond
Original Path: web-protege
fail on error

Revision 17757 - Directory Listing
Modified Wed Mar 10 21:51:31 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added setUserEmail

Revision 17756 - Directory Listing
Modified Wed Mar 10 21:51:14 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
added setUserEmail

Revision 17740 - Directory Listing
Modified Tue Mar 9 02:21:57 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed methods and imports that do not compile

Revision 17739 - Directory Listing
Modified Tue Mar 9 02:21:18 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed methods and imports that do not compile

Revision 17738 - Directory Listing
Modified Tue Mar 9 02:20:13 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed unused import

Revision 17737 - Directory Listing
Modified Tue Mar 9 02:00:45 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing UrlParams way of setting parameters to the store for Pagination. Also using parameterized class for return object

Revision 17736 - Directory Listing
Modified Tue Mar 9 02:00:04 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removed because of using a parameterized class PaginationData instead.

Revision 17735 - Directory Listing
Modified Tue Mar 9 01:59:52 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removed because of using a parameterized class PaginationData instead.

Revision 17734 - Directory Listing
Modified Tue Mar 9 01:52:41 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17733 - Directory Listing
Modified Tue Mar 9 01:52:32 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17732 - Directory Listing
Modified Tue Mar 9 01:52:23 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17731 - Directory Listing
Modified Tue Mar 9 01:52:15 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17730 - Directory Listing
Modified Tue Mar 9 01:52:05 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17729 - Directory Listing
Modified Tue Mar 9 01:51:56 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using PaginationData, a parameterized class for returning data

Revision 17728 - Directory Listing
Modified Tue Mar 9 01:49:09 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Adding a parameterized class for Pagination data

Revision 17727 - Directory Listing
Modified Tue Mar 9 01:47:43 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Using parameterized class for returning data for Paginated grids.

Revision 17726 - Directory Listing
Modified Tue Mar 9 01:45:28 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing UrlParams way of setting parameters to the store for Pagination. Also using parameterized class for return object

Revision 17725 - Directory Listing
Modified Tue Mar 9 01:44:30 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing UrlParams way of setting params. Also using parameterized class for return object

Revision 17724 - Directory Listing
Modified Tue Mar 9 01:42:40 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing method of setting UrlParams for parameters in the store

Revision 17723 - Directory Listing
Modified Tue Mar 9 01:42:05 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing method of setting UrlParams for parameters in the store

Revision 17722 - Directory Listing
Modified Tue Mar 9 01:41:12 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing method of setting UrlParams for parameters in the store

Revision 17721 - Directory Listing
Modified Tue Mar 9 01:40:21 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing method of setting UrlParams for parameters in the store

Revision 17720 - Directory Listing
Modified Tue Mar 9 01:39:44 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Removing method of setting UrlParams for parameters in the store

Revision 17684 - Directory Listing
Modified Mon Mar 8 21:12:16 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Made changes to show window only after the results have been populated

Revision 17683 - Directory Listing
Modified Mon Mar 8 21:12:08 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Cleaning comments

Revision 17682 - Directory Listing
Modified Mon Mar 8 21:11:38 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Made changes to show window only after the results have been populated

Revision 17659 - Directory Listing
Modified Sun Mar 7 02:02:57 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
moved the search record set

Revision 17658 - Directory Listing
Modified Sun Mar 7 02:00:03 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed comments

Revision 17657 - Directory Listing
Modified Sun Mar 7 01:55:34 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
got rid of the unnecessary horizontal scrollbar

Revision 17656 - Directory Listing
Modified Sun Mar 7 01:53:30 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
minor

Revision 17655 - Directory Listing
Modified Sun Mar 7 01:53:17 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
setHeight
removed commented code

Revision 17654 - Directory Listing
Modified Sun Mar 7 01:52:50 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed set size...

Revision 17653 - Directory Listing
Modified Sun Mar 7 01:04:01 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
fix some logic and formatting issues

Revision 17652 - Directory Listing
Modified Sun Mar 7 00:25:48 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
make the selected tab title underline

Revision 17651 - Directory Listing
Modified Sun Mar 7 00:24:34 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
moved the changeDatarecord set

Revision 17650 - Directory Listing
Modified Sun Mar 7 00:24:24 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
moved the changeDatarecord set

Revision 17649 - Directory Listing
Modified Sun Mar 7 00:21:40 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
moved the change data record set in another package

Revision 17648 - Directory Listing
Modified Sun Mar 7 00:21:18 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
moved the changeDatarecord set

Revision 17647 - Directory Listing
Modified Sun Mar 7 00:18:22 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed the all properties pagination things

Revision 17646 - Directory Listing
Modified Sun Mar 7 00:17:36 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed a java 6 annotation

Revision 17645 - Directory Listing
Modified Sun Mar 7 00:17:17 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed the paginated get entity triples

Revision 17644 - Directory Listing
Modified Sun Mar 7 00:16:45 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
removed the paginated get entity triples

Revision 17643 - Directory Listing
Modified Sun Mar 7 00:11:07 2010 UTC (7 years, 7 months ago) by tudorache
Original Path: web-protege
restored to non-paginating widget

Revision 17639 - Directory Listing
Modified Sat Mar 6 01:51:59 2010 UTC (7 years, 7 months ago) by nyulas
Original Path: web-protege
Auto-fit the search results in the window where it is displayed.

Revision 17637 - Directory Listing
Modified Sat Mar 6 01:41:19 2010 UTC (7 years, 7 months ago) by nyulas
Original Path: web-protege
added header texts for the columns

Revision 17616 - Directory Listing
Modified Sat Mar 6 00:46:12 2010 UTC (7 years, 7 months ago) by nyulas
Original Path: web-protege
Added back @Override annotation for the implementation of the Function.execute() method, which is fine for Java 1.6 and up! Also got rid of some unnecessary imports.

Revision 17612 - Directory Listing
Modified Fri Mar 5 23:55:12 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Made changes for Java and GWT compliance

Revision 17610 - Directory Listing
Modified Fri Mar 5 23:40:49 2010 UTC (7 years, 7 months ago) by nyulas
Original Path: web-protege
Fix added to auto-fit the properties tree into the window where it is displayed.

Revision 17607 - Directory Listing
Modified Fri Mar 5 23:26:05 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Patch: Fixed the Page size change bug. Hiding the Refresh button in the Paging Toolbar

Revision 17599 - Directory Listing
Modified Fri Mar 5 21:21:14 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
removing console prints

Revision 17559 - Directory Listing
Modified Thu Mar 4 02:21:22 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
added remote pagination method for Search

Revision 17558 - Directory Listing
Modified Thu Mar 4 02:20:38 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Adding Remote pagination api for search

Revision 17557 - Directory Listing
Modified Thu Mar 4 02:20:32 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Adding Remote pagination api for search

Revision 17556 - Directory Listing
Modified Thu Mar 4 02:20:24 2010 UTC (7 years, 7 months ago) by kasturi
Original Path: web-protege
Adding Remote pagination api for search

Revision