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Support for configurable logging and for junit tests.
Set the java build version to 1.5 and added a first cut at the junit target. The junit target needs some work - there are still tests left that have dependencies on the user environment.
Made changes to build related files so that the Ant build file works with the zipped version of the Protege source code on the Downloads page of the Web site and also works after doing a checkout from the Subversion repository.
re-added protege directory with new name of protege-core
moved some files from trunk/bin to trunk
added ant build script and support files for compiling protege source code. we distribute these with our source distribution
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